RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 RDH11Q8TC12 318 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 DAZLQ92904 295 aaKnown RBP12.07□□□□□ -0.48
CLCN6-205ENST00000376492 RNASE6Q93091 150 aaKnown RBP12.07□□□□□ -0.48
CLCN6-205ENST00000376492 CDK15Q96Q40 435 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 MTERF1Q99551 399 aaKnown RBP12.07□□□□□ -0.48
CLCN6-205ENST00000376492 IQCGQ9H095 443 aaKnown RBP12.07□□□□□ -0.48
CLCN6-205ENST00000376492 OR51B5Q9H339 312 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 LYRM4Q9HD34 91 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 EMCNQ9ULC0 261 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 DAPP1Q9UN19 280 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 EDARQ9UNE0 448 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 MRPS33Q9Y291 106 aaKnown RBP12.07□□□□□ -0.48
CLCN6-205ENST00000376492 PLLPQ9Y342 182 aa12.07□□□□□ -0.48
CLCN6-205ENST00000376492 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.07□□□□□ -0.48
CLCN6-205ENST00000376492 TMEM120BA0PK00 339 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 HSPB2A8KAH6 182 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 G3V2L1 256 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 PPP6CO00743 305 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 DVL2O14641 736 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 BIRC5O15392 142 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 LDB3O75112 727 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 SNUPNO95149 360 aaKnown RBP12.06□□□□□ -0.48
CLCN6-205ENST00000376492 LRATO95237 230 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 ETHE1O95571 254 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 OTCP00480 354 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 INHBBP09529 407 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 DHRS4L1P0CG22 281 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 HIST1H1TP22492 207 aaPredicted RBP12.06□□□□□ -0.48
CLCN6-205ENST00000376492 ATP5A1P25705 553 aaKnown RBP12.06□□□□□ -0.48
CLCN6-205ENST00000376492 HOXC12P31275 282 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 PEX19P40855 299 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 TRPC1P48995 793 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 CDH13P55290 713 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 NAA20P61599 178 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 PHEXP78562 749 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 CLCQ05315 142 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 ASPHQ12797 758 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 CUL3Q13618 768 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 RCN2Q14257 317 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 DAZAP2Q15038 168 aaPredicted RBP12.06□□□□□ -0.48
CLCN6-205ENST00000376492 HSPB2Q16082 182 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 AP5B1Q2VPB7 878 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 POMZP3Q6PJE2 187 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 OPN5Q6U736 354 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 ZNF793Q6ZN11 406 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 RPS27LQ71UM5 84 aaKnown RBP12.06□□□□□ -0.48
CLCN6-205ENST00000376492 HOMEZQ8IX15 550 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 ACOT4Q8N9L9 421 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 RGMAQ96B86 450 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 ARSGQ96EG1 525 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 L3HYPDHQ96EM0 354 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 MDFIQ99750 246 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 ALOXE3Q9BYJ1 711 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 PLEKHF2Q9H8W4 249 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 COPS7BQ9H9Q2 264 aaPredicted RBP12.06□□□□□ -0.48
CLCN6-205ENST00000376492 SH2D2AQ9NP31 389 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 VTI1BQ9UEU0 232 aa12.06□□□□□ -0.48
CLCN6-205ENST00000376492 KIAA1324LA8MWY0 1029 aaPredicted RBP12.05□□□□□ -0.48
CLCN6-205ENST00000376492 PLIN3O60664 434 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 CTNSO60931 367 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 SUPT7LO94864 414 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 PROCP04070 461 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 TNNI3P19429 210 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 MDH1P40925 334 aaKnown RBP12.05□□□□□ -0.48
CLCN6-205ENST00000376492 ETV4P43268 484 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 NEK2P51955 445 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 RPS13P62277 151 aaKnown RBP12.05□□□□□ -0.48
CLCN6-205ENST00000376492 KCNJ2P63252 427 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 STX4Q12846 297 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 DDX39BQ13838 428 aaKnown RBP12.05□□□□□ -0.48
CLCN6-205ENST00000376492 ZNF791Q3KP31 576 aaPredicted RBP12.05□□□□□ -0.48
CLCN6-205ENST00000376492 FBXL19-AS1Q494R0 122 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 ACSF3Q4G176 576 aaPredicted RBP12.05□□□□□ -0.48
CLCN6-205ENST00000376492 FRG2Q64ET8 278 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 OR4C11Q6IEV9 310 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 ZYG11AQ6WRX3 759 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 PRIMA1Q86XR5 153 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 TRIM42Q8IWZ5 723 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 FBXW8Q8N3Y1 598 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 ZCCHC7Q8N3Z6 543 aaKnown RBP12.05□□□□□ -0.48
CLCN6-205ENST00000376492 RNF175Q8N4F7 328 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 OR4F6Q8NGB9 312 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 OR8K3Q8NH51 312 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 LINC01560Q8TB33 94 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 TRPC4APQ8TEL6 797 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 ZNF721Q8TF20 911 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 CCDC126Q96EE4 140 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 TMEM237Q96Q45 408 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 FRG2BQ96QU4 278 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 CENPKQ9BS16 269 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 PROK2Q9HC23 129 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 INTS9Q9NV88 658 aaKnown RBP12.05□□□□□ -0.48
CLCN6-205ENST00000376492 ZNF225Q9UK10 706 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 ADAM21Q9UKJ8 722 aa12.05□□□□□ -0.48
CLCN6-205ENST00000376492 TUBAL3A6NHL2 446 aa12.04□□□□□ -0.48
CLCN6-205ENST00000376492 SAP18O00422 153 aaKnown RBP12.04□□□□□ -0.48
CLCN6-205ENST00000376492 RTCAO00442 366 aaKnown RBP12.04□□□□□ -0.48
CLCN6-205ENST00000376492 PLPP1O14494 284 aa12.04□□□□□ -0.48
CLCN6-205ENST00000376492 KLF11O14901 512 aa12.04□□□□□ -0.48
CLCN6-205ENST00000376492 SHOX2O60902 331 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms