RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 FRG2Q64ET8 278 aa12.23□□□□□ -0.45
MSH5-204ENST00000375755 BRAT1Q6PJG6 821 aa12.23□□□□□ -0.45
MSH5-204ENST00000375755 CEACAM20Q6UY09 585 aa12.23□□□□□ -0.45
MSH5-204ENST00000375755 CERS6Q6ZMG9 384 aa12.23□□□□□ -0.45
MSH5-204ENST00000375755 KIAA0907Q7Z7F0 614 aaPredicted RBP12.23□□□□□ -0.45
MSH5-204ENST00000375755 KIF18BQ86Y91 864 aa12.23□□□□□ -0.45
MSH5-204ENST00000375755 NPAS3Q8IXF0 933 aa12.23□□□□□ -0.45
MSH5-204ENST00000375755 C1orf52Q8N6N3 182 aaKnown RBP12.23□□□□□ -0.45
MSH5-204ENST00000375755 NFKBIDQ8NI38 313 aa12.23□□□□□ -0.45
MSH5-204ENST00000375755 FGF13Q92913 245 aa12.23□□□□□ -0.45
MSH5-204ENST00000375755 C1GALT1C1Q96EU7 318 aa12.23□□□□□ -0.45
MSH5-204ENST00000375755 FRG2BQ96QU4 278 aa12.23□□□□□ -0.45
MSH5-204ENST00000375755 WACQ9BTA9 647 aa12.23□□□□□ -0.45
MSH5-204ENST00000375755 HTATIP2Q9BUP3 242 aa12.23□□□□□ -0.45
MSH5-204ENST00000375755 LIN7BQ9HAP6 207 aa12.23□□□□□ -0.45
MSH5-204ENST00000375755 PPIL1Q9Y3C6 166 aa12.23□□□□□ -0.45
MSH5-204ENST00000375755 AP1M2Q9Y6Q5 423 aa12.23□□□□□ -0.45
MSH5-204ENST00000375755 DOCK9Q9BZ29 2069 aa12.23□□□□□ -0.45
MSH5-204ENST00000375755 DSPPQ9NZW4 1301 aa12.23□□□□□ -0.45
MSH5-204ENST00000375755 A0A0A6YYJ9 748 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 TMEM202A6NGA9 273 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 NPIPB8E9PQR5 432 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 PRMT3O60678 531 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 CPEP16870 476 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 ETV5P41161 510 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 RPIAP49247 311 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 ETV1P50549 477 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 IKZF1Q13422 519 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 ZNF284Q2VY69 593 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 GAB4Q2WGN9 574 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 TMEM201Q5SNT2 666 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 ZNF770Q6IQ21 691 aaPredicted RBP12.22□□□□□ -0.45
MSH5-204ENST00000375755 KIAA1324Q6UXG2 1013 aaKnown RBP12.22□□□□□ -0.45
MSH5-204ENST00000375755 CACUL1Q86Y37 369 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.22□□□□□ -0.45
MSH5-204ENST00000375755 TM9SF4Q92544 642 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 TM9SF2Q99805 663 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 MED18Q9BUE0 208 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 WRAP53Q9BUR4 548 aaKnown RBP12.22□□□□□ -0.45
MSH5-204ENST00000375755 REV1Q9UBZ9 1251 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 ENOPH1Q9UHY7 261 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 TNRC18O15417 2968 aaPredicted RBP12.22□□□□□ -0.45
MSH5-204ENST00000375755 HEPACAM2A8MVW5 462 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 PSIP1O75475 530 aaKnown RBP12.22□□□□□ -0.45
MSH5-204ENST00000375755 FGF19O95750 216 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 RECQLP46063 649 aaPredicted RBP12.22□□□□□ -0.45
MSH5-204ENST00000375755 CCDC85BQ15834 202 aaPredicted RBP12.22□□□□□ -0.45
MSH5-204ENST00000375755 CRTC2Q53ET0 693 aaPredicted RBP12.22□□□□□ -0.45
MSH5-204ENST00000375755 TRILQ7L0X0 811 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 C16orf62Q7Z3J2 963 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 CELF5Q8N6W0 485 aaKnown RBP12.22□□□□□ -0.45
MSH5-204ENST00000375755 TMEM163Q8TC26 289 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 AP3S1Q92572 193 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 SENP5Q96HI0 755 aaPredicted RBP12.22□□□□□ -0.45
MSH5-204ENST00000375755 DPCDQ9BVM2 203 aaPredicted RBP12.22□□□□□ -0.45
MSH5-204ENST00000375755 PIGUQ9H490 435 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 ING4Q9UNL4 249 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 RPL36Q9Y3U8 105 aaKnown RBP12.22□□□□□ -0.45
MSH5-204ENST00000375755 NUP210Q8TEM1 1887 aaPredicted RBP12.22□□□□□ -0.45
MSH5-204ENST00000375755 OR2AG2A6NM03 316 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 AGAP14A8MT82 685 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 SCAMP2O15127 329 aaKnown RBP12.22□□□□□ -0.45
MSH5-204ENST00000375755 AVPR1BP47901 424 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 EVX1P49640 407 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 CLCNKAP51800 687 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 CTBP2P56545 445 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 CTAG1AP78358 180 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 KCNC3Q14003 757 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 SCARB2Q14108 478 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 ZNF57Q68EA5 555 aaPredicted RBP12.22□□□□□ -0.45
MSH5-204ENST00000375755 GPR139Q6DWJ6 353 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 TYW3Q6IPR3 259 aaKnown RBP12.22□□□□□ -0.45
MSH5-204ENST00000375755 PRSS42Q7Z5A4 293 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 LILRA3Q8N6C8 439 aaPredicted RBP12.22□□□□□ -0.45
MSH5-204ENST00000375755 TCEANCQ8N8B7 351 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 L3MBTL4Q8NA19 623 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 CREB3L1Q96BA8 519 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 RIOK2Q9BVS4 552 aaKnown RBP12.22□□□□□ -0.45
MSH5-204ENST00000375755 IL36AQ9UHA7 158 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 CORO2BQ9UQ03 480 aa12.22□□□□□ -0.45
MSH5-204ENST00000375755 SPEGQ15772 3267 aa12.21□□□□□ -0.45
MSH5-204ENST00000375755 TRBV4-1A0A0J9YWV2 114 aa12.21□□□□□ -0.45
MSH5-204ENST00000375755 SH3BGRLO75368 114 aa12.21□□□□□ -0.45
MSH5-204ENST00000375755 NCR1O76036 304 aa12.21□□□□□ -0.45
MSH5-204ENST00000375755 HOXD4P09016 255 aaPredicted RBP12.21□□□□□ -0.45
MSH5-204ENST00000375755 PPIBP23284 216 aaKnown RBP12.21□□□□□ -0.45
MSH5-204ENST00000375755 INPP1P49441 399 aa12.21□□□□□ -0.45
MSH5-204ENST00000375755 FGFBP1Q14512 234 aa12.21□□□□□ -0.45
MSH5-204ENST00000375755 CPTPQ5TA50 214 aa12.21□□□□□ -0.45
MSH5-204ENST00000375755 METTL3Q86U44 580 aaKnown RBP12.21□□□□□ -0.45
MSH5-204ENST00000375755 CBARPQ8N350 705 aaPredicted RBP12.21□□□□□ -0.45
MSH5-204ENST00000375755 OR11H7Q8NGC8 314 aa12.21□□□□□ -0.45
MSH5-204ENST00000375755 OR6C4Q8NGE1 309 aa12.21□□□□□ -0.45
MSH5-204ENST00000375755 GEMIN6Q8WXD5 167 aaKnown RBP12.21□□□□□ -0.45
MSH5-204ENST00000375755 UCN3Q969E3 161 aa12.21□□□□□ -0.45
MSH5-204ENST00000375755 SORCS2Q96PQ0 1159 aa12.21□□□□□ -0.45
MSH5-204ENST00000375755 MED28Q9H204 178 aa12.21□□□□□ -0.45
MSH5-204ENST00000375755 ZDHHC3Q9NYG2 299 aa12.21□□□□□ -0.45
MSH5-204ENST00000375755 MARK1Q9P0L2 795 aa12.21□□□□□ -0.45
MSH5-204ENST00000375755 BTNL2Q9UIR0 455 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms