RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 POM121BA6NF01 834 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 TFECO14948 347 aaPredicted RBP13.2□□□□□ -0.3
MSH5-202ENST00000375740 PRKRAO75569 313 aaKnown RBP13.2□□□□□ -0.3
MSH5-202ENST00000375740 CYP7B1O75881 506 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 GSTM5P46439 218 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 TRA2BP62995 288 aaKnown RBP13.2□□□□□ -0.3
MSH5-202ENST00000375740 HYAL2Q12891 473 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 ADAM15Q13444 863 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 PUM1Q14671 1186 aaKnown RBP eCLIP13.2□□□□□ -0.3
MSH5-202ENST00000375740 PROX2Q3B8N5 592 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 NDUFAF5Q5TEU4 345 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 FBXL6Q8N531 539 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 SIMC1Q8NDZ2 872 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 TTLQ8NG68 377 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 OR2L3Q8NG85 312 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 OR9Q2Q8NGE9 314 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 MAP6Q96JE9 813 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 RNF170Q96K19 258 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 RSPO3Q9BXY4 272 aaPredicted RBP13.2□□□□□ -0.3
MSH5-202ENST00000375740 PRRG3Q9BZD7 231 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 RANGRFQ9HD47 186 aaPredicted RBP13.2□□□□□ -0.3
MSH5-202ENST00000375740 KLHL20Q9Y2M5 609 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 CCDC88CQ9P219 2028 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 GLOD5A6NK44 160 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 C4orf51C9J302 202 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 HMGN4O00479 90 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 GADD45GO95257 159 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 PEBP1P30086 187 aaKnown RBP13.2□□□□□ -0.3
MSH5-202ENST00000375740 S100A5P33763 92 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 GGT2P36268 569 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 HTR2BP41595 481 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 LIMS1P48059 325 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 HMGA2P52926 109 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 ZNF45Q02386 682 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 GPR50Q13585 617 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 TP53BP2Q13625 1128 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 TMEM35AQ53FP2 167 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 SCARF2Q96GP6 870 aaPredicted RBP13.2□□□□□ -0.3
MSH5-202ENST00000375740 ITPAQ9BY32 194 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 GLIPR2Q9H4G4 154 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 ACSS1Q9NUB1 689 aaPredicted RBP13.2□□□□□ -0.3
MSH5-202ENST00000375740 TAS2R7Q9NYW3 318 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 POFUT2Q9Y2G5 429 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 PCDHGA2Q9Y5H1 932 aa13.2□□□□□ -0.3
MSH5-202ENST00000375740 MN1Q10571 1320 aaPredicted RBP13.2□□□□□ -0.3
MSH5-202ENST00000375740 IFNW1P05000 195 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 DRD2P14416 443 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 POU2F1P14859 743 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 RHCEP18577 417 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 PRKCDQ05655 676 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 LRRC32Q14392 662 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 YIF1BQ5BJH7 314 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 ZNF605Q86T29 641 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 OR8K5Q8NH50 307 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 DNASE1L2Q92874 299 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 MS4A6EQ96DS6 147 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 ZNF764Q96H86 408 aaPredicted RBP13.19□□□□□ -0.3
MSH5-202ENST00000375740 SERHL2Q9H4I8 314 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 RPRD1BQ9NQG5 326 aaKnown RBP13.19□□□□□ -0.3
MSH5-202ENST00000375740 PRDM7Q9NQW5 492 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 CA5BQ9Y2D0 317 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 PRSS38A1L453 326 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 ARHGAP33O14559 1287 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 ERI3O43414 337 aaKnown RBP13.19□□□□□ -0.3
MSH5-202ENST00000375740 EML2O95834 649 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 APOA1P02647 267 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 ABATP80404 500 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 SLC9A5Q14940 896 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 GPR32P1Q8NGA4 272 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 AMDHD1Q96NU7 426 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 NXF2Q9GZY0 626 aaKnown RBP13.19□□□□□ -0.3
MSH5-202ENST00000375740 SYNPO2LQ9H987 977 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 SLC35C2Q9NQQ7 365 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 TBC1D29Q9UFV1 150 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 HCN4Q9Y3Q4 1203 aa13.19□□□□□ -0.3
MSH5-202ENST00000375740 ISM1B1AKI9 464 aa13.18□□□□□ -0.3
MSH5-202ENST00000375740 CDK2AP1O14519 115 aa13.18□□□□□ -0.3
MSH5-202ENST00000375740 PGRMC2O15173 223 aa13.18□□□□□ -0.3
MSH5-202ENST00000375740 CCNB2O95067 398 aa13.18□□□□□ -0.3
MSH5-202ENST00000375740 OR12D1P0DN82 309 aa13.18□□□□□ -0.3
MSH5-202ENST00000375740 CD72P21854 359 aa13.18□□□□□ -0.3
MSH5-202ENST00000375740 CTHP32929 405 aa13.18□□□□□ -0.3
MSH5-202ENST00000375740 GPC1P35052 558 aa13.18□□□□□ -0.3
MSH5-202ENST00000375740 UGT2B10P36537 528 aa13.18□□□□□ -0.3
MSH5-202ENST00000375740 DDOSTP39656 456 aa13.18□□□□□ -0.3
MSH5-202ENST00000375740 RFX2P48378 723 aa13.18□□□□□ -0.3
MSH5-202ENST00000375740 LIM2P55344 173 aa13.18□□□□□ -0.3
MSH5-202ENST00000375740 TUBA1BP68363 451 aa13.18□□□□□ -0.3
MSH5-202ENST00000375740 MLC1Q15049 377 aa13.18□□□□□ -0.3
MSH5-202ENST00000375740 ZMAT1Q5H9K5 638 aa13.18□□□□□ -0.3
MSH5-202ENST00000375740 TOR1AIP1Q5JTV8 583 aa13.18□□□□□ -0.3
MSH5-202ENST00000375740 ENPP7Q6UWV6 458 aa13.18□□□□□ -0.3
MSH5-202ENST00000375740 TUBA1AQ71U36 451 aa13.18□□□□□ -0.3
MSH5-202ENST00000375740 RD3Q7Z3Z2 195 aa13.18□□□□□ -0.3
MSH5-202ENST00000375740 SZRD1Q7Z422 152 aa13.18□□□□□ -0.3
MSH5-202ENST00000375740 OR4E2Q8NGC2 313 aa13.18□□□□□ -0.3
MSH5-202ENST00000375740 OR5H6Q8NGV6 325 aa13.18□□□□□ -0.3
MSH5-202ENST00000375740 APOBEC4Q8WW27 367 aaKnown RBP13.18□□□□□ -0.3
MSH5-202ENST00000375740 SIPA1Q96FS4 1042 aa13.18□□□□□ -0.3
MSH5-202ENST00000375740 OR2M4Q96R27 311 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms