RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 CLEC2LP0C7M8 214 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 ACADMP11310 421 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 DRD2P14416 443 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 EPCAMP16422 314 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 S100A1P23297 94 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 BUD31P41223 144 aaPredicted RBP13.73□□□□□ -0.21
MSH5-201ENST00000375703 SSR2P43308 183 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 NCBP2P52298 156 aaKnown RBP eCLIP13.73□□□□□ -0.219e-7■■■■□ 23.4
MSH5-201ENST00000375703 SMSP52788 366 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 EFNB1P98172 346 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 BNC1Q01954 994 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 SCN1BQ07699 218 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 HNRNPA0Q13151 305 aaKnown RBP13.73□□□□□ -0.21
MSH5-201ENST00000375703 C1orf53Q5VUE5 145 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 C1GALT1C1Q96EU7 318 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 BBS4Q96RK4 519 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 C17orf62Q9BQA9 187 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 MENTQ9BUN1 341 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 LGR4Q9BXB1 951 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 PITHD1Q9GZP4 211 aaPredicted RBP13.73□□□□□ -0.21
MSH5-201ENST00000375703 FBXW2Q9UKT8 454 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 LRRK1Q38SD2 2015 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 A0A1W2PQL4 384 aaPredicted RBP13.72□□□□□ -0.21
MSH5-201ENST00000375703 GLOD5A6NK44 160 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 EPPINO95925 133 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 TIMP1P01033 207 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 PCCBP05166 539 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 NR2F6P10588 404 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 TRA2BP62995 288 aaKnown RBP13.72□□□□□ -0.21
MSH5-201ENST00000375703 CSNK1G2P78368 415 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 DAB2P98082 770 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 TAB1Q15750 504 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 ENTPD8Q5MY95 495 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 ATAD3CQ5T2N8 411 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 MORN4Q8NDC4 146 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 BBS10Q8TAM1 723 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 CREB3L4Q8TEY5 395 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 DDX28Q9NUL7 540 aaKnown RBP13.72□□□□□ -0.21
MSH5-201ENST00000375703 LTBP2Q14767 1821 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 A0A0A6YYD5 115 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 A0A1W2PQ09 198 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 FABP12A6NFH5 140 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 IDH3BO43837 385 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 APOL3O95236 402 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 MSL3P1P0C860 447 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 TCEA1P23193 301 aaKnown RBP13.72□□□□□ -0.21
MSH5-201ENST00000375703 PTGER1P34995 402 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 CLCNKAP51800 687 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 WNT4P56705 351 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 GPR19Q15760 415 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 FLYWCH1Q4VC44 716 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 OR2G6Q5TZ20 316 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 KIAA1211LQ6NV74 962 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 ADAMTSL4Q6UY14 1074 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 MEX3DQ86XN8 651 aaKnown RBP13.72□□□□□ -0.21
MSH5-201ENST00000375703 GATAD2AQ86YP4 633 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 CLDN22Q8N7P3 220 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 TP53I13Q8NBR0 393 aaPredicted RBP13.72□□□□□ -0.21
MSH5-201ENST00000375703 C17orf50Q8WW18 174 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 GATAD2BQ8WXI9 593 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 DIRAS2Q96HU8 199 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 BCL2L10Q9HD36 194 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 ZSCAN32Q9NX65 697 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 DEC1Q9P2X7 70 aa13.72□□□□□ -0.21
MSH5-201ENST00000375703 PLEKHB1Q9UF11 243 aaPredicted RBP13.72□□□□□ -0.21
MSH5-201ENST00000375703 MRPS23Q9Y3D9 190 aaKnown RBP13.72□□□□□ -0.21
MSH5-201ENST00000375703 KIAA0355O15063 1070 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 PRKRAO75569 313 aaKnown RBP13.71□□□□□ -0.21
MSH5-201ENST00000375703 ERAL1O75616 437 aaKnown RBP13.71□□□□□ -0.21
MSH5-201ENST00000375703 CHRM4P08173 479 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 GSTM3P21266 225 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 SDC2P34741 201 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 VIPR2P41587 438 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 KHKP50053 298 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 ZNF234Q14588 700 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 GLYR1Q49A26 553 aaPredicted RBP13.71□□□□□ -0.21
MSH5-201ENST00000375703 C3orf38Q5JPI3 329 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 XKRXQ6PP77 449 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 RTL10Q7L3V2 364 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 LINC01555Q8NAE3 123 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 SLC9A6Q92581 669 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 ZFYVE19Q96K21 471 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 MSLNLQ96KJ4 702 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 PRRC1Q96M27 445 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 KCTD7Q96MP8 289 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 FERD3LQ96RJ6 166 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 FAIM2Q9BWQ8 316 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 OR2B2Q9GZK3 357 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 MIXL1Q9H2W2 232 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 EGLN3Q9H6Z9 239 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 LRIT2A6NDA9 550 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 CLEC3AO75596 197 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 SLC35G4P0C7Q5 338 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 ALPPL2P10696 532 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 ACP2P11117 423 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 NTSP30990 170 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 P2RY2P41231 377 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 SLC9A3P48764 834 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 TAS2R38P59533 333 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 CDK3Q00526 305 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms