RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 NFATC2Q13469 925 aa5.72□□□□□ -1.49
SCN2A-202ENST00000375427 EXOSC2Q13868 293 aaKnown RBP5.72□□□□□ -1.49
SCN2A-202ENST00000375427 ENDOGQ14249 297 aaKnown RBP5.72□□□□□ -1.49
SCN2A-202ENST00000375427 PLAC9Q5JTB6 97 aa5.72□□□□□ -1.49
SCN2A-202ENST00000375427 PPP1R18Q6NYC8 613 aa5.72□□□□□ -1.49
SCN2A-202ENST00000375427 Q6ZN92 141 aa5.72□□□□□ -1.49
SCN2A-202ENST00000375427 OR2T11Q8NH01 316 aa5.72□□□□□ -1.49
SCN2A-202ENST00000375427 NECTIN4Q96NY8 510 aa5.72□□□□□ -1.49
SCN2A-202ENST00000375427 FAM103A1Q9BTL3 118 aaKnown RBP5.72□□□□□ -1.49
SCN2A-202ENST00000375427 ARHGAP39Q9C0H5 1083 aa5.72□□□□□ -1.49
SCN2A-202ENST00000375427 TP63Q9H3D4 680 aaPredicted RBP5.72□□□□□ -1.49
SCN2A-202ENST00000375427 DNAJC5Q9H3Z4 198 aa5.72□□□□□ -1.49
SCN2A-202ENST00000375427 CWH43Q9H720 699 aa5.72□□□□□ -1.49
SCN2A-202ENST00000375427 FAM217BQ9NTX9 383 aaPredicted RBP5.72□□□□□ -1.49
SCN2A-202ENST00000375427 PCDHB7Q9Y5E2 793 aa5.72□□□□□ -1.49
SCN2A-202ENST00000375427 NR2E3Q9Y5X4 410 aa5.72□□□□□ -1.49
SCN2A-202ENST00000375427 SYCP2Q9BX26 1530 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 NCAPD3P42695 1498 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 SHROOM3Q8TF72 1996 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.71□□□□□ -1.49
SCN2A-202ENST00000375427 A0A1W2PPW3 197 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 HDAC3O15379 428 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 TBPP20226 339 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 DRD1P21728 446 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 COILP38432 576 aaPredicted RBP5.71□□□□□ -1.49
SCN2A-202ENST00000375427 ACTR1BP42025 376 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 SIM1P81133 766 aaPredicted RBP5.71□□□□□ -1.49
SCN2A-202ENST00000375427 DSC2Q02487 901 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 RELQ04864 619 aaPredicted RBP5.71□□□□□ -1.49
SCN2A-202ENST00000375427 HNRNPDQ14103 355 aaKnown RBP5.71□□□□□ -1.49
SCN2A-202ENST00000375427 HIST3H3Q16695 136 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 KDM4DQ6B0I6 523 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 RHBDD2Q6NTF9 364 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 SLC29A4Q7RTT9 530 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 ZMIZ2Q8NF64 920 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 OR8G5Q8NG78 346 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 FNDC9Q8TBE3 224 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 ITPAQ9BY32 194 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 COL20A1Q9P218 1284 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 HRH3Q9Y5N1 445 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 PMS2P1A4D2B8 440 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 TP53I11O14683 189 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 PRKYO43930 277 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 EOMESO95936 686 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 DNAL4O96015 105 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 G6PDP11413 515 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 ACKR3P25106 362 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 GSK3AP49840 483 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 ERVFRD-1P60508 538 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 RAB11AP62491 216 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 IRF5Q13568 498 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 ZACNQ401N2 412 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 NRSN1Q8IZ57 195 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 FBXO36Q8NEA4 188 aa5.71□□□□□ -1.49
SCN2A-202ENST00000375427 SLC25A44Q96H78 314 aaPredicted RBP5.71□□□□□ -1.49
SCN2A-202ENST00000375427 ZNF552Q9H707 407 aaPredicted RBP5.71□□□□□ -1.49
SCN2A-202ENST00000375427 POLR3AO14802 1390 aaPredicted RBP5.71□□□□□ -1.5
SCN2A-202ENST00000375427 FBLL1A6NHQ2 334 aaKnown RBP5.71□□□□□ -1.5
SCN2A-202ENST00000375427 GNRH1P01148 92 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 TMEM225BP0DP42 221 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 ALADP13716 330 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 IL12BP29460 328 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 CSN1S1P47710 185 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 CPTPQ5TA50 214 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 TMEM244Q5VVB8 128 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 C11orf57Q6ZUT1 292 aaPredicted RBP5.71□□□□□ -1.5
SCN2A-202ENST00000375427 SLAIN1Q8ND83 568 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 OR2T35Q8NGX2 323 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 OR10Z1Q8NGY1 313 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 GPR119Q8TDV5 335 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 TRIB2Q92519 343 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 GON7Q9BXV9 100 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 FLRT3Q9NZU0 649 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 SLC17A6Q9P2U8 582 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.71□□□□□ -1.5
SCN2A-202ENST00000375427 TMEM210A6NLX4 147 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF185O15231 689 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 JAK2O60674 1132 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF780AO75290 641 aaPredicted RBP5.71□□□□□ -1.5
SCN2A-202ENST00000375427 CSF2P04141 144 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 ALDOBP05062 364 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 SERPINE2P07093 398 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 TAF1AQ15573 450 aaPredicted RBP5.71□□□□□ -1.5
SCN2A-202ENST00000375427 ETFDHQ16134 617 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 GLT8D1Q68CQ7 371 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 LIAT1Q6ZQX7 453 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 RFPL4BQ6ZWI9 263 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 ERASQ7Z444 233 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 HSD17B13Q7Z5P4 300 aaPredicted RBP5.71□□□□□ -1.5
SCN2A-202ENST00000375427 C12orf29Q8N999 325 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 FAM213BQ8TBF2 198 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 SHC3Q92529 594 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 UTP4Q969X6 686 aaKnown RBP5.71□□□□□ -1.5
SCN2A-202ENST00000375427 PWWP2AQ96N64 755 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 CD180Q99467 661 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 NARFLQ9H6Q4 476 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 C19orf25Q9UFG5 118 aaPredicted RBP5.71□□□□□ -1.5
SCN2A-202ENST00000375427 STRAPQ9Y3F4 350 aaKnown RBP5.71□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF670-ZNF695F2Z2N8 137 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 PRAF2O60831 178 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms