RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 C6orf203Q9P0P8 240 aaPredicted RBP13.54□□□□□ -0.24
CDKN1A-202ENST00000373711 TBK1Q9UHD2 729 aa13.54□□□□□ -0.24
CDKN1A-202ENST00000373711 MTO1Q9Y2Z2 717 aaKnown RBP13.54□□□□□ -0.24
CDKN1A-202ENST00000373711 SONP18583 2426 aaKnown RBP13.54□□□□□ -0.24
CDKN1A-202ENST00000373711 CDC7O00311 574 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 FGF17O60258 216 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 TMCC2O75069 709 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 LRATO95237 230 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 INHBAP08476 426 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 ALOX15P16050 662 aaPredicted RBP13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 ATP5A1P25705 553 aaKnown RBP13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 MC3RP41968 323 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 SSR2P43308 183 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 PTH2RP49190 550 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 HERVK_113P63132 956 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 ERVK-8P63133 956 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 DMTNQ08495 405 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 EBPQ15125 230 aaKnown RBP13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 SPRED3Q2MJR0 410 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 KRT71Q3SY84 523 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 TMEM35AQ53FP2 167 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 HLA-DQA1Q5Y7H0 255 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 HMBOX1Q6NT76 420 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 ST13P4Q8IZP2 240 aaPredicted RBP13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 ACOT4Q8N9L9 421 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 SPPL2AQ8TCT8 520 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 TANKQ92844 425 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 WNT2BQ93097 391 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 PIK3IP1Q96FE7 263 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 TMEM41AQ96HV5 264 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 VPS39Q96JC1 886 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 MED18Q9BUE0 208 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 ERVK-6Q9BXR3 956 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 ANGPTL4Q9BY76 406 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 ZNF180Q9UJW8 692 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 ERVK-19Q9WJR5 959 aa13.53□□□□□ -0.24
CDKN1A-202ENST00000373711 NPEPPSL1A6NEC2 478 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 A8MXE2 369 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 MSTNO14793 375 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 ATP8B1O43520 1251 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 OR10H2O60403 315 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 SCELO95171 688 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 CPN1P15169 458 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 KRT15P19012 456 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 HIST1H1TP22492 207 aaPredicted RBP13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 SPRP35270 261 aaPredicted RBP13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 SLC6A12P48065 614 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 RASA2Q15283 850 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 WIPI1Q5MNZ9 446 aaPredicted RBP13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 MEIOBQ8N635 442 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 MZB1Q8WU39 189 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 TMEM171Q8WVE6 324 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 UBE2E3Q969T4 207 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 TP53INP1Q96A56 240 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 INTS12Q96CB8 462 aaKnown RBP13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 GNRHR2Q96P88 292 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 F2RL3Q96RI0 385 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 UCN2Q96RP3 112 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 CENPKQ9BS16 269 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 RHOJQ9H4E5 214 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 CXorf56Q9H5V9 222 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 RPF2Q9H7B2 306 aaKnown RBP13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 PPCSQ9HAB8 311 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 TMBIM4Q9HC24 238 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 DNAJC11Q9NVH1 559 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 TXNDC16Q9P2K2 825 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 PSMC3IPQ9P2W1 217 aaPredicted RBP13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 LGALS13Q9UHV8 139 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 PHF11Q9UIL8 331 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 NPFFR2Q9Y5X5 522 aa13.52□□□□□ -0.25
CDKN1A-202ENST00000373711 C2orf92A0A1B0GVN3 265 aa13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 A0A1W2PPM1 405 aa13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 TBX6O95947 436 aaPredicted RBP13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 TP53P04637 393 aaPredicted RBP13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 CRYGSP22914 178 aa13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 SERPINB1P30740 379 aa13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 BUD31P41223 144 aaPredicted RBP13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 SERPINB9P50453 376 aa13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 PGGT1BP53609 377 aa13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 SLC37A1P57057 533 aa13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 PCDH1Q08174 1060 aa13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 FOXF2Q12947 444 aa13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 ZNF267Q14586 743 aaPredicted RBP13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 SETDB1Q15047 1291 aa13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 EIPR1Q53HC9 387 aa13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 DCST1Q5T197 706 aa13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 MROH9Q5TGP6 573 aa13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 ZNF793Q6ZN11 406 aa13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 PLEKHM3Q6ZWE6 761 aa13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 VN1R5Q7Z5H4 357 aa13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 FAM83FQ8NEG4 500 aaPredicted RBP13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 OR1J4Q8NGS1 313 aa13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 RIT1Q92963 219 aa13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 ARL8AQ96BM9 186 aa13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 PPWD1Q96BP3 646 aaKnown RBP13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 RHBDF1Q96CC6 855 aa13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 TUBA1CQ9BQE3 449 aa13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 MS4A8Q9BY19 250 aa13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 TEX10Q9NXF1 929 aaPredicted RBP13.51□□□□□ -0.25
CDKN1A-202ENST00000373711 WWOXQ9NZC7 414 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms