RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 AKR7A2O43488 359 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 FABP1P07148 127 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 ARSBP15848 533 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 GTF2E2P29084 291 aaKnown RBP6.48□□□□□ -1.37
CSDE1-204ENST00000369530 ARSFP54793 590 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 IRF9Q00978 393 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 TRAF3Q13114 568 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 CLCA4Q14CN2 919 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 TRIP6Q15654 476 aaKnown RBP6.48□□□□□ -1.37
CSDE1-204ENST00000369530 CTSL3PQ5NE16 218 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 NUDT18Q6ZVK8 323 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 IKBIPQ70UQ0 350 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 SYVN1Q86TM6 617 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 FAM9CQ8IZT9 166 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 AMER2Q8N7J2 671 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 RASGEF1AQ8N9B8 481 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 SLC38A4Q969I6 547 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 NEDD4LQ96PU5 975 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 DCSTAMPQ9H295 470 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 OR51M1Q9H341 326 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 BPIFA1Q9NP55 256 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 FAM118AQ9NWS6 357 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 BABAM2Q9NXR7 383 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 V9GYH0 126 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 GOLGA4Q13439 2230 aaKnown RBP6.48□□□□□ -1.37
CSDE1-204ENST00000369530 DNAH3Q8TD57 4116 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 CHD6Q8TD26 2715 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-204ENST00000369530 MMP20O60882 483 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 SYPP08247 313 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 ALPIP09923 528 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 THRBP10828 461 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 WT1P19544 449 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-204ENST00000369530 EFNA1P20827 205 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-204ENST00000369530 CALCRP30988 508 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 MSX2P35548 267 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-204ENST00000369530 MASP1P48740 699 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 RHOAP61586 193 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 NCS1P62166 190 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 ERV3-1Q14264 604 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 TAF1AQ15573 450 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-204ENST00000369530 SLC35F1Q5T1Q4 408 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 PSAPL1Q6NUJ1 521 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 SUSD1Q6UWL2 747 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 STX12Q86Y82 276 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 SPNS2Q8IVW8 549 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 ZZZ3Q8IYH5 903 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 CAMKVQ8NCB2 501 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 FAM110BQ8TC76 370 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 BTN2A2Q8WVV5 523 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 HGDQ93099 445 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 PHF21BQ96EK2 531 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 C19orf60Q96EN9 201 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 PPP1R16AQ96I34 528 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 BBC3Q96PG8 261 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-204ENST00000369530 SLC22A4Q9H015 551 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 NMRAL1Q9HBL8 299 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 CCNB1IP1Q9NPC3 277 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 WARS2Q9UGM6 360 aaKnown RBP6.48□□□□□ -1.37
CSDE1-204ENST00000369530 SNX6Q9UNH7 406 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 KCTD3Q9Y597 815 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 CCDC88CQ9P219 2028 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 HEATR5BQ9P2D3 2071 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 hCG_1807616A0A1W2PRN6 198 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 SLC22A23A1A5C7 686 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 OR6C70A6NIJ9 312 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 C9orf172C9J069 976 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 NDUFS6O75380 124 aaKnown RBP6.48□□□□□ -1.37
CSDE1-204ENST00000369530 SLCO2B1O94956 709 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 POU2F1P14859 743 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 GRK6P43250 576 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 NAGLUP54802 743 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 LRRC74AQ0VAA2 488 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 PFKFB4Q16877 469 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 CYP27C1Q4G0S4 372 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 HSD17B12Q53GQ0 312 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 ZRANB3Q5FWF4 1079 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 TRILQ7L0X0 811 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 LUZP2Q86TE4 346 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 PHACTR4Q8IZ21 702 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 KBTBD8Q8NFY9 601 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 ELMO1Q92556 727 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 RORBQ92753 470 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 SLC41A2Q96JW4 573 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 RBBP8Q99708 897 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 RNF121Q9H920 327 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 FZD3Q9NPG1 666 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 NUFIP1Q9UHK0 495 aaKnown RBP6.48□□□□□ -1.37
CSDE1-204ENST00000369530 PURGQ9UJV8 347 aaKnown RBP6.48□□□□□ -1.37
CSDE1-204ENST00000369530 PILRAQ9UKJ1 303 aa6.48□□□□□ -1.37
CSDE1-204ENST00000369530 NCOA6Q14686 2063 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-204ENST00000369530 EFCAB9A8MZ26 197 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 CRCPO75575 148 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 IPO13O94829 963 aaKnown RBP6.47□□□□□ -1.37
CSDE1-204ENST00000369530 VAMP1P23763 118 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 ASMTP46597 345 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 RNF144AP50876 292 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-204ENST00000369530 LIMK2P53671 638 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 ZMYND11Q15326 602 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 HES5Q5TA89 166 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms