RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 TEX10Q9NXF1 929 aaPredicted RBP10.07□□□□□ -0.8
TPM3-212ENST00000368533 THUMPD1Q9NXG2 353 aaKnown RBP10.07□□□□□ -0.8
TPM3-212ENST00000368533 STMN3Q9NZ72 180 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 FBXW2Q9UKT8 454 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 DNMT3AQ9Y6K1 912 aaPredicted RBP10.07□□□□□ -0.8
TPM3-212ENST00000368533 NINQ8N4C6 2090 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 CCDC88CQ9P219 2028 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 SPTY2D1-AS1A0A0U1RR47 76 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 SUV39H1O43463 412 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 C6orf47O95873 294 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 MT-ND2P03891 347 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 CTSBP07858 339 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 PCMT1P22061 227 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 UQCRC1P31930 480 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 GAB1Q13480 694 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 STK11Q15831 433 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 TBRG1Q3YBR2 411 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 SLC44A2Q8IWA5 706 aaPredicted RBP10.07□□□□□ -0.8
TPM3-212ENST00000368533 ZZZ3Q8IYH5 903 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 C16orf78Q8WTQ4 265 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 RSC1A1Q92681 617 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 SNAPC3Q92966 411 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 REPS1Q96D71 796 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 LGALS12Q96DT0 336 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 KCNC2Q96PR1 638 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 ANKRA2Q9H9E1 313 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 RANGRFQ9HD47 186 aaPredicted RBP10.07□□□□□ -0.8
TPM3-212ENST00000368533 MIEF1Q9NQG6 463 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 KCNN3Q9UGI6 736 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.07□□□□□ -0.8
TPM3-212ENST00000368533 POLHQ9Y253 713 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 PCDHB11Q9Y5F2 797 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 COLEC10Q9Y6Z7 277 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 RP1P56715 2156 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 GPR89AB7ZAQ6 455 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 SCAMP2O15127 329 aaKnown RBP10.07□□□□□ -0.8
TPM3-212ENST00000368533 TMPRSS11DO60235 418 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 KLHL18O94889 574 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 GABARAPO95166 117 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 APBB3O95704 486 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 GPR89BP0CG08 455 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 FPR1P21462 350 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 SSR2P43308 183 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 HTR3AP46098 478 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 IDH2P48735 452 aaKnown RBP10.07□□□□□ -0.8
TPM3-212ENST00000368533 ST13P50502 369 aaKnown RBP10.07□□□□□ -0.8
TPM3-212ENST00000368533 MAPK12P53778 367 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 WNT3P56703 355 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 GABARAPL2P60520 117 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 Q6ZPB1 254 aaPredicted RBP10.07□□□□□ -0.8
TPM3-212ENST00000368533 HMGN2P46Q86SG4 172 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 SERPINA11Q86U17 422 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 LAS2Q8IYD9 372 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 ADGRF3Q8IZF5 1079 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 OR4A15Q8NGL6 344 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 ZHX1-C8orf76Q96EF9 292 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 ST6GAL2Q96JF0 529 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 RHBGQ9H310 441 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 IL21RQ9HBE5 538 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 ERVK13-1Q9NX77 482 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 CPNE7Q9UBL6 633 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 MRPS17Q9Y2R5 130 aaKnown RBP10.07□□□□□ -0.8
TPM3-212ENST00000368533 HCRTR1O43613 425 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 RGS10O43665 173 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 DNAJB6O75190 326 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 RYKP34925 604 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 RABIFP47224 123 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 OR1E2P47887 323 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 PRIM2P49643 509 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 RPP38P78345 283 aaKnown RBP10.06□□□□□ -0.8
TPM3-212ENST00000368533 ZNF763Q0D2J5 394 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 HSPB3Q12988 150 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 KHDRBS2Q5VWX1 349 aaKnown RBP10.06□□□□□ -0.8
TPM3-212ENST00000368533 SLX4IPQ5VYV7 408 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 ABI3BPQ7Z7G0 1075 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 SLC9B2Q86UD5 537 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 UTP15Q8TED0 518 aaKnown RBP10.06□□□□□ -0.8
TPM3-212ENST00000368533 SETD7Q8WTS6 366 aaKnown RBP10.06□□□□□ -0.8
TPM3-212ENST00000368533 ORAI3Q9BRQ5 295 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 LRRC61Q9BV99 259 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 SIT1Q9Y3P8 196 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 SLC16A6O15403 523 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 ERAL1O75616 437 aaKnown RBP10.06□□□□□ -0.8
TPM3-212ENST00000368533 RRM2P31350 389 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 PTGS2P35354 604 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 LSSP48449 732 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 CLK1P49759 484 aaKnown RBP10.06□□□□□ -0.8
TPM3-212ENST00000368533 CD83Q01151 205 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 SLAMF1Q13291 335 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 MPEG1Q2M385 716 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 SPIN4Q56A73 249 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 ERICH5Q6P6B1 374 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 ZNF793Q6ZN11 406 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 UBE2J2Q8N2K1 259 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 DENND6BQ8NEG7 585 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 OR2L8Q8NGY9 312 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 TEFMQ96QE5 360 aaKnown RBP10.06□□□□□ -0.8
TPM3-212ENST00000368533 KIR3DX1Q9H7L2 352 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 BRF2Q9HAW0 419 aa10.06□□□□□ -0.8
TPM3-212ENST00000368533 FKBP14Q9NWM8 211 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms