RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 PNLIPRP3Q17RR3 467 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 SGSM1Q2NKQ1 1148 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 ASTE1Q2TB18 679 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 AP5B1Q2VPB7 878 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 DPCR1Q3MIW9 517 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 C2CD6Q53TS8 623 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 KRT79Q5XKE5 535 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 KRT39Q6A163 491 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 KIAA1324Q6UXG2 1013 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 TMIGD1Q6UXZ0 262 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 C11orf57Q6ZUT1 292 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 ZNF551Q7Z340 670 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 RD3Q7Z3Z2 195 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 ABI3BPQ7Z7G0 1075 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 LUZP2Q86TE4 346 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 VRK2Q86Y07 508 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 CLVS1Q8IUQ0 354 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 NUDCD3Q8IVD9 361 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 BOLLQ8N9W6 283 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 COLGALT1Q8NBJ5 622 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 CLEC1AQ8NC01 280 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 OR4K14Q8NGD5 310 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 OR52L2PQ8NGH6 319 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 OR13F1Q8NGS4 319 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 OIT3Q8WWZ8 545 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 FIG4Q92562 907 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 MRGPRFQ96AM1 343 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 ULK4Q96C45 1275 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 C16orf58Q96GQ5 468 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 C5orf34Q96MH7 638 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 THAP7Q9BT49 309 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 PRRG3Q9BZD7 231 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 LHX5Q9H2C1 402 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 OR51B6Q9H340 312 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 RIMS4Q9H426 269 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 CDCP1Q9H5V8 836 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 MED20Q9H944 212 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 ENTPD7Q9NQZ7 604 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 DUSP22Q9NRW4 184 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 SETD4Q9NVD3 440 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 HIF1ANQ9NWT6 349 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 ASB6Q9NWX5 421 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 TMEM161AQ9NX61 479 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 NDE1Q9NXR1 346 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 CLEC5AQ9NY25 188 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 GRHL1Q9NZI5 618 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 HACD3Q9P035 362 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 GCNT4Q9P109 453 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 ATXN10Q9UBB4 475 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 WARS2Q9UGM6 360 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 APOBEC3BQ9UH17 382 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 UBQLN2Q9UHD9 624 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 LNPEPQ9UIQ6 1025 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 CRLS1Q9UJA2 301 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 ADAM21Q9UKJ8 722 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 CDH9Q9ULB4 789 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 MGAT4BQ9UQ53 548 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 ERGIC3Q9Y282 383 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 COX11Q9Y6N1 276 aa4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 MUC22E2RYF6 1773 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-204ENST00000368292 COL4A2P08572 1712 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 PTPRBP23467 1997 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 MGAQ8IWI9 3026 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 TBC1D3DA0A087WVF3 549 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 TBC1D3IA0A087WXS9 549 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 TBC1D3EA0A087X179 549 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 TBC1D3KA0A087X1G2 549 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 TEX13CA0A0J9YWL9 993 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 TBC1D3BA6NDS4 549 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 TBC1D3FA6NER0 549 aaPredicted RBP4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 ANKRD61A6NGH8 418 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 TBC1D3LB9A6J9 549 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 TEX22C9J3V5 150 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 NPIPA2E9PIF3 369 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 ITGB1BP1O14713 200 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 LDLRAD4O15165 306 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 HCN1O60741 890 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 SCN2BO60939 215 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 CSDE1O75534 798 aaKnown RBP4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 JRKO75564 520 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 TRUB2O95900 331 aaKnown RBP4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 KRT6AP02538 564 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 LYNP07948 512 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 TBC1D3HP0C7X1 549 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 PLA2G4BP0C869 781 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 STAG3L1P0CL83 205 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 NQO2P16083 231 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 CEBPBP17676 345 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 ENGP17813 658 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 WT1P19544 449 aaPredicted RBP4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 UGT1A1P22309 533 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 FPR3P25089 353 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 GNA11P29992 359 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 HMOX2P30519 316 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 AKT2P31751 481 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 GTF2H1P32780 548 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 RPS9P46781 194 aaKnown RBP4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 SLC6A12P48065 614 aa4.75□□□□□ -1.65
ECHDC1-204ENST00000368292 CSNK1EP49674 416 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms