RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 NR0B1P51843 470 aaKnown RBP20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 FHL5Q5TD97 284 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 ANKRD26P1Q6NSI1 321 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 SULF2Q8IWU5 870 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 PSD4Q8NDX1 1056 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 OR52R1Q8NGF1 315 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 SLC22A8Q8TCC7 542 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 TUBGCP3Q96CW5 907 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 PPP1R36Q96LQ0 422 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 BBS4Q96RK4 519 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 C1orf50Q9BV19 199 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 CLMPQ9H6B4 373 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 REEP4Q9H6H4 257 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 BCAP29Q9UHQ4 241 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 GTF3C1Q12789 2109 aa20.71■□□□□ 0.91
ECHDC1-203ENST00000368291 AKAP10O43572 662 aa20.71■□□□□ 0.91
ECHDC1-203ENST00000368291 RNFT1Q5M7Z0 435 aa20.71■□□□□ 0.91
ECHDC1-203ENST00000368291 FAM9CQ8IZT9 166 aa20.71■□□□□ 0.91
ECHDC1-203ENST00000368291 LIX1Q8N485 282 aa20.71■□□□□ 0.91
ECHDC1-203ENST00000368291 CPSF7Q8N684 471 aaKnown RBP20.71■□□□□ 0.91
ECHDC1-203ENST00000368291 ST6GALNAC3Q8NDV1 305 aa20.71■□□□□ 0.91
ECHDC1-203ENST00000368291 C17orf47Q8NEP4 570 aa20.71■□□□□ 0.91
ECHDC1-203ENST00000368291 OR7G2Q8NG99 324 aa20.71■□□□□ 0.91
ECHDC1-203ENST00000368291 RAB3IL1Q8TBN0 382 aa20.71■□□□□ 0.91
ECHDC1-203ENST00000368291 GLIPR2Q9H4G4 154 aa20.71■□□□□ 0.91
ECHDC1-203ENST00000368291 TIMMDC1Q9NPL8 285 aa20.71■□□□□ 0.91
ECHDC1-203ENST00000368291 THAP1Q9NVV9 213 aa20.71■□□□□ 0.91
ECHDC1-203ENST00000368291 KLF13Q9Y2Y9 288 aaPredicted RBP20.71■□□□□ 0.91
ECHDC1-203ENST00000368291 NCKAP5O14513 1909 aa20.7■□□□□ 0.9
ECHDC1-203ENST00000368291 CRYABP02511 175 aaKnown RBP20.7■□□□□ 0.9
ECHDC1-203ENST00000368291 FBXO45P0C2W1 286 aa20.7■□□□□ 0.9
ECHDC1-203ENST00000368291 EDN3P14138 238 aa20.7■□□□□ 0.9
ECHDC1-203ENST00000368291 SRSF1Q07955 248 aaKnown RBP eCLIP20.7■□□□□ 0.9
ECHDC1-203ENST00000368291 IL23RQ5VWK5 629 aa20.7■□□□□ 0.9
ECHDC1-203ENST00000368291 TMEM64Q6YI46 380 aa20.7■□□□□ 0.9
ECHDC1-203ENST00000368291 RTL4Q6ZR62 310 aa20.7■□□□□ 0.9
ECHDC1-203ENST00000368291 FNDC5Q8NAU1 212 aa20.7■□□□□ 0.9
ECHDC1-203ENST00000368291 GOLM1Q8NBJ4 401 aa20.7■□□□□ 0.9
ECHDC1-203ENST00000368291 ERP27Q96DN0 273 aa20.7■□□□□ 0.9
ECHDC1-203ENST00000368291 SPACA9Q96E40 222 aaPredicted RBP20.7■□□□□ 0.9
ECHDC1-203ENST00000368291 AMDHD1Q96NU7 426 aa20.7■□□□□ 0.9
ECHDC1-203ENST00000368291 ITPAQ9BY32 194 aa20.7■□□□□ 0.9
ECHDC1-203ENST00000368291 NXF5Q9H1B4 397 aaKnown RBP20.7■□□□□ 0.9
ECHDC1-203ENST00000368291 MANSC1Q9H8J5 431 aa20.7■□□□□ 0.9
ECHDC1-203ENST00000368291 SH2D2AQ9NP31 389 aa20.7■□□□□ 0.9
ECHDC1-203ENST00000368291 A0A0G2JMM0 328 aa20.69■□□□□ 0.9
ECHDC1-203ENST00000368291 A0A1W2PPB8 328 aa20.69■□□□□ 0.9
ECHDC1-203ENST00000368291 A0A1W2PRS3 328 aa20.69■□□□□ 0.9
ECHDC1-203ENST00000368291 CLEC18AA5D8T8 446 aa20.69■□□□□ 0.9
ECHDC1-203ENST00000368291 ANKUB1A6NFN9 424 aa20.69■□□□□ 0.9
ECHDC1-203ENST00000368291 KIR3DP1A8MWS1 328 aa20.69■□□□□ 0.9
ECHDC1-203ENST00000368291 PEX1O43933 1283 aa20.69■□□□□ 0.9
ECHDC1-203ENST00000368291 PLOD3O60568 738 aa20.69■□□□□ 0.9
ECHDC1-203ENST00000368291 NME6O75414 186 aaPredicted RBP20.69■□□□□ 0.9
ECHDC1-203ENST00000368291 CCL3P10147 92 aa20.69■□□□□ 0.9
ECHDC1-203ENST00000368291 ASMTP46597 345 aa20.69■□□□□ 0.9
ECHDC1-203ENST00000368291 MEOX1P50221 254 aa20.69■□□□□ 0.9
ECHDC1-203ENST00000368291 NCBP2P52298 156 aaKnown RBP eCLIP20.69■□□□□ 0.9
ECHDC1-203ENST00000368291 GPR85P60893 370 aa20.69■□□□□ 0.9
ECHDC1-203ENST00000368291 OCRLQ01968 901 aa20.69■□□□□ 0.9
ECHDC1-203ENST00000368291 PTGR1Q14914 329 aa20.69■□□□□ 0.9
ECHDC1-203ENST00000368291 EIF2S3LQ2VIR3 472 aaKnown RBP20.69■□□□□ 0.9
ECHDC1-203ENST00000368291 CLEC18BQ6UXF7 455 aa20.69■□□□□ 0.9
ECHDC1-203ENST00000368291 FAM98AQ8NCA5 519 aaKnown RBP20.69■□□□□ 0.9
ECHDC1-203ENST00000368291 CLEC18CQ8NCF0 446 aa20.69■□□□□ 0.9
ECHDC1-203ENST00000368291 CIDECQ96AQ7 238 aaPredicted RBP20.69■□□□□ 0.9
ECHDC1-203ENST00000368291 SGCZQ96LD1 299 aa20.69■□□□□ 0.9
ECHDC1-203ENST00000368291 NUF2Q9BZD4 464 aa20.69■□□□□ 0.9
ECHDC1-203ENST00000368291 AKTIPQ9H8T0 292 aa20.69■□□□□ 0.9
ECHDC1-203ENST00000368291 CFL2Q9Y281 166 aa20.69■□□□□ 0.9
ECHDC1-203ENST00000368291 PINLYPA6NC86 204 aa20.68■□□□□ 0.9
ECHDC1-203ENST00000368291 MAPK1P28482 360 aa20.68■□□□□ 0.9
ECHDC1-203ENST00000368291 NTSP30990 170 aa20.68■□□□□ 0.9
ECHDC1-203ENST00000368291 FRKP42685 505 aaPredicted RBP20.68■□□□□ 0.9
ECHDC1-203ENST00000368291 EMX2Q04743 252 aa20.68■□□□□ 0.9
ECHDC1-203ENST00000368291 SMU1Q2TAY7 513 aa20.68■□□□□ 0.9
ECHDC1-203ENST00000368291 HLA-DQA1Q5Y7H0 255 aa20.68■□□□□ 0.9
ECHDC1-203ENST00000368291 ATG16L1Q676U5 607 aa20.68■□□□□ 0.9
ECHDC1-203ENST00000368291 SIAH3Q8IW03 269 aa20.68■□□□□ 0.9
ECHDC1-203ENST00000368291 KIRREL3Q8IZU9 778 aa20.68■□□□□ 0.9
ECHDC1-203ENST00000368291 TAGAPQ8N103 731 aa20.68■□□□□ 0.9
ECHDC1-203ENST00000368291 NUDT8Q8WV74 236 aa20.68■□□□□ 0.9
ECHDC1-203ENST00000368291 PPCDCQ96CD2 204 aa20.68■□□□□ 0.9
ECHDC1-203ENST00000368291 MEAF6Q9HAF1 191 aa20.68■□□□□ 0.9
ECHDC1-203ENST00000368291 RYDENQ9NUL5 291 aaKnown RBP20.68■□□□□ 0.9
ECHDC1-203ENST00000368291 ATP6V1HQ9UI12 483 aa20.68■□□□□ 0.9
ECHDC1-203ENST00000368291 NPFFR2Q9Y5X5 522 aa20.68■□□□□ 0.9
ECHDC1-203ENST00000368291 FREM3P0C091 2139 aa20.67■□□□□ 0.9
ECHDC1-203ENST00000368291 FLNCQ14315 2725 aa20.67■□□□□ 0.9
ECHDC1-203ENST00000368291 KLRC4-KLRK1H3BQV0 150 aa20.67■□□□□ 0.9
ECHDC1-203ENST00000368291 PLOD2O00469 737 aa20.67■□□□□ 0.9
ECHDC1-203ENST00000368291 PDPK1O15530 556 aa20.67■□□□□ 0.9
ECHDC1-203ENST00000368291 BCAS2O75934 225 aaPredicted RBP20.67■□□□□ 0.9
ECHDC1-203ENST00000368291 PRPS2P11908 318 aa20.67■□□□□ 0.9
ECHDC1-203ENST00000368291 MC3RP41968 323 aa20.67■□□□□ 0.9
ECHDC1-203ENST00000368291 NNATQ16517 81 aa20.67■□□□□ 0.9
ECHDC1-203ENST00000368291 NTRK2Q16620 822 aa20.67■□□□□ 0.9
ECHDC1-203ENST00000368291 ZNF551Q7Z340 670 aaPredicted RBP20.67■□□□□ 0.9
ECHDC1-203ENST00000368291 TRIM42Q8IWZ5 723 aa20.67■□□□□ 0.9
ECHDC1-203ENST00000368291 ZFP62Q8NB50 900 aaPredicted RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms