RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 CBX7O95931 251 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 KRT6AP02538 564 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 KRT6BP04259 564 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ABCB1P08183 1280 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 GLI4P10075 376 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 NAGAP17050 411 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 CSNK2A2P19784 350 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 NT5EP21589 574 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 FEN1P39748 380 aaKnown RBP12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 CASP3P42574 277 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 KRT6CP48668 564 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 HTR6P50406 440 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 PKNOX1P55347 436 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 LCP2Q13094 533 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 BICRALQ6AI39 1079 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 TMEM81Q6P7N7 255 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 GALNT18Q6P9A2 607 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 GPRIN3Q6ZVF9 776 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ACAD11Q709F0 780 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 CCDC71Q8IV32 467 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 VWA5B2Q8N398 1253 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 GBP7Q8N8V2 638 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 OR5M3Q8NGP4 307 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 NEIL3Q8TAT5 605 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 METTL6Q8TCB7 284 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 SARAFQ96BY9 339 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 C14orf79Q96F83 325 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 LURAP1Q96LR2 239 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 DOHHQ9BU89 302 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 NXF5Q9H1B4 397 aaKnown RBP12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 NPDC1Q9NQX5 325 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 DCDC2Q9UHG0 476 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 PSME2Q9UL46 239 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 POLQO75417 2590 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 CELSR1Q9NYQ6 3014 aa12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 FIGNL2A6NMB9 653 aa12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 CAPN14A8MX76 684 aa12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 FOXO6A8MYZ6 492 aa12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 TP53I11O14683 189 aa12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 WDR1O75083 606 aa12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ERAL1O75616 437 aaKnown RBP12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 SNX4O95219 450 aa12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ESRRBO95718 433 aa12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ENO1P06733 434 aaKnown RBP12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 HOXD4P09016 255 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ABCD3P28288 659 aa12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 EMDP50402 254 aa12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 EXOSC7Q15024 291 aaKnown RBP12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 CEBPEQ15744 281 aa12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 TRMT12Q53H54 448 aaKnown RBP12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 FAM180BQ6P0A1 224 aa12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ZNF585AQ6P3V2 769 aa12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 DIO2Q92813 273 aa12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 HGDQ93099 445 aa12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 APIPQ96GX9 242 aa12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 FAIM2Q9BWQ8 316 aa12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 UCK2Q9BZX2 261 aa12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 LDAHQ9H6V9 325 aa12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 TBK1Q9UHD2 729 aa12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 STK38LQ9Y2H1 464 aa12.53□□□□□ -0.4
TNFRSF1A-202ENST00000366159 A0A0G2JNJ9 132 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 NKX2-6A6NCS4 301 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 TO15178 435 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 PROCP04070 461 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 SHBGP04278 402 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 HPNP05981 417 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 DRD2P14416 443 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 DRD5P21918 477 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 MSX1P28360 303 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 SSTR2P30874 369 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 DEKP35659 375 aaKnown RBP12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ADH7P40394 386 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 PTGDSP41222 190 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 TMED10P49755 219 aaKnown RBP12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 FOXA1P55317 472 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 NRG3P56975 720 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 KRTAP10-9P60411 292 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 HMGCS1Q01581 520 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 LTB4RQ15722 352 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ZNF628Q5EBL2 1059 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 WLSQ5T9L3 541 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 HLA-DQA1Q5Y7H0 255 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 TMEM198Q66K66 360 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 B3GNT6Q6ZMB0 384 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 SEM1Q6ZVN7 128 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 TDRPQ86YL5 185 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 GSPT2Q8IYD1 628 aaKnown RBP12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 PRR22Q8IZ63 422 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ADCY4Q8NFM4 1077 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ZNF675Q8TD23 568 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 KLHL29Q96CT2 875 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 HSPBAP1Q96EW2 488 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 TMEM41AQ96HV5 264 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ZNF597Q96LX8 424 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 RILPQ96NA2 401 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 KCNA7Q96RP8 456 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ITPAQ9BY32 194 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 BRINP2Q9C0B6 783 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 SLC6A15Q9H2J7 730 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms