RNA–Protein interactions for RNA: ENST00000363727.1

RNU1-87P-201, Transcript of RNA, U1 small nuclear 87, pseudogene, humanhuman

BASIC

Gene RNU1-87P, Length 170 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-87P-201ENST00000363727 SYNDIG1Q9H7V2 258 aa4.14□□□□□ -1.75
RNU1-87P-201ENST00000363727 MED20Q9H944 212 aa4.14□□□□□ -1.75
RNU1-87P-201ENST00000363727 PARVGQ9HBI0 331 aa4.14□□□□□ -1.75
RNU1-87P-201ENST00000363727 SLC40A1Q9NP59 571 aa4.14□□□□□ -1.75
RNU1-87P-201ENST00000363727 NOCTQ9UK39 431 aaKnown RBP4.14□□□□□ -1.75
RNU1-87P-201ENST00000363727 TNNQ9UQP3 1299 aa4.14□□□□□ -1.75
RNU1-87P-201ENST00000363727 MRPS33Q9Y291 106 aaKnown RBP4.14□□□□□ -1.75
RNU1-87P-201ENST00000363727 STK38LQ9Y2H1 464 aa4.14□□□□□ -1.75
RNU1-87P-201ENST00000363727 ATG4BQ9Y4P1 393 aa4.14□□□□□ -1.75
RNU1-87P-201ENST00000363727 FADS3Q9Y5Q0 445 aa4.14□□□□□ -1.75
RNU1-87P-201ENST00000363727 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.14□□□□□ -1.75
RNU1-87P-201ENST00000363727 SF3B1O75533 1304 aaKnown RBP eCLIP4.14□□□□□ -1.75
RNU1-87P-201ENST00000363727 CDHR2Q9BYE9 1310 aa4.14□□□□□ -1.75
RNU1-87P-201ENST00000363727 NUP155O75694 1391 aa4.14□□□□□ -1.75
RNU1-87P-201ENST00000363727 SMARCA4P51532 1647 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 ARHGEF11O15085 1522 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 SLC15A5A6NIM6 579 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 ACOD1A6NK06 481 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 OR52A4PA6NMU1 304 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 ANKRD30BLA7E2S9 258 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 A8MUI8 341 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 GOLGA8SH3BPF8 625 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 CETN3O15182 167 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 TM7SF2O76062 418 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 STBD1O95210 358 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 FGFR1OPO95684 399 aaKnown RBP4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 PABPC4LP0CB38 370 aaKnown RBP4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 STAG3L1P0CL83 205 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 IGHV4-38-2P0DP08 117 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 RRASP10301 218 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 CASP14P31944 242 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 FCGR2BP31994 310 aaPredicted RBP4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 PRDX2P32119 198 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 HSD17B3P37058 310 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 HSPA9P38646 679 aaKnown RBP4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 MAGEA1P43355 309 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 CDX1P47902 265 aaPredicted RBP4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 RGS4P49798 205 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 BLVRAP53004 296 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 IRX4P78413 519 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 BASP1P80723 227 aaKnown RBP4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 MAT1AQ00266 395 aaKnown RBP4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 DNAJC3Q13217 504 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 HNRNPDQ14103 355 aaKnown RBP4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 ITIH4Q14624 930 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 PDK3Q15120 406 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 ANKRD55Q3KP44 614 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 ITPRIPL2Q3MIP1 535 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 ZCWPW2Q504Y3 356 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 SPDYCQ5MJ68 293 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 FAM166AQ6J272 317 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 CWC27Q6UX04 472 aaKnown RBP4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 CEACAM20Q6UY09 585 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 KDM7AQ6ZMT4 941 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 NCCRP1Q6ZVX7 275 aaPredicted RBP4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 TRPT1Q86TN4 253 aaKnown RBP4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 CDR2LQ86X02 465 aaPredicted RBP4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 DCUN1D3Q8IWE4 304 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 LSMEM2Q8N112 164 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 EID3Q8N140 333 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 THEM5Q8N1Q8 247 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 THAP8Q8NA92 274 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 C17orf47Q8NEP4 570 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 DNAJA4Q8WW22 397 aaPredicted RBP4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 CDKL2Q92772 493 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 GGHQ92820 318 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 OSTF1Q92882 214 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 SLC35B4Q969S0 331 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 RFT1Q96AA3 541 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 KIAA1143Q96AT1 154 aaPredicted RBP4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 C11orf24Q96F05 449 aaPredicted RBP4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 SLC41A3Q96GZ6 507 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 SENP5Q96HI0 755 aaPredicted RBP4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 C17orf62Q9BQA9 187 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 RIOK1Q9BRS2 568 aaKnown RBP4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 CENPKQ9BS16 269 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 NMNAT2Q9BZQ4 307 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 LAT2Q9GZY6 243 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 DCLRE1BQ9H816 532 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 WDR76Q9H967 626 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 MRPL17Q9NRX2 175 aaKnown RBP4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 AGPAT3Q9NRZ7 376 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 RMND1Q9NWS8 449 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 ZDHHC2Q9UIJ5 367 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 LRRC42Q9Y546 428 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 BZW2Q9Y6E2 419 aaKnown RBP4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 ZHX2Q9Y6X8 837 aa4.13□□□□□ -1.75
RNU1-87P-201ENST00000363727 PTPRTO14522 1441 aa4.12□□□□□ -1.75
RNU1-87P-201ENST00000363727 NOTCH4Q99466 2003 aa4.12□□□□□ -1.75
RNU1-87P-201ENST00000363727 FANCAO15360 1455 aa4.12□□□□□ -1.75
RNU1-87P-201ENST00000363727 LMTK2Q8IWU2 1503 aa4.12□□□□□ -1.75
RNU1-87P-201ENST00000363727 ASXL1Q8IXJ9 1541 aa4.12□□□□□ -1.75
RNU1-87P-201ENST00000363727 IGLV9-49A0A0B4J1Y8 123 aa4.12□□□□□ -1.75
RNU1-87P-201ENST00000363727 LOC101059948A0A1B0GTJ6 334 aa4.12□□□□□ -1.75
RNU1-87P-201ENST00000363727 SMIM31A0A1B0GVY4 71 aa4.12□□□□□ -1.75
RNU1-87P-201ENST00000363727 MAGEB16A2A368 324 aa4.12□□□□□ -1.75
RNU1-87P-201ENST00000363727 OR2AG2A6NM03 316 aa4.12□□□□□ -1.75
RNU1-87P-201ENST00000363727 SMIM1B2RUZ4 78 aa4.12□□□□□ -1.75
RNU1-87P-201ENST00000363727 ZNF197O14709 1029 aa4.12□□□□□ -1.75
RNU1-87P-201ENST00000363727 OR4F21O95013 312 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms