RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 ERVK-19Q9WJR5 959 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 RTCAO00442 366 aaKnown RBP17.53■□□□□ 0.4
SHANK1-202ENST00000359082 FAM189A1O60320 539 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 SCGB2A1O75556 95 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 PORP16435 677 aaPredicted RBP17.53■□□□□ 0.4
SHANK1-202ENST00000359082 CD34P28906 385 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 ZXDBP98169 803 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 ARHGAP11AQ6P4F7 1023 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 GSG1LQ6UXU4 331 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 ZNF783Q6ZMS7 281 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 ZNF420Q8TAQ5 688 aaPredicted RBP17.53■□□□□ 0.4
SHANK1-202ENST00000359082 SORCS1Q8WY21 1168 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 LRR1Q96L50 414 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 SULT4A1Q9BR01 284 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 FOXD2O60548 495 aaPredicted RBP17.53■□□□□ 0.4
SHANK1-202ENST00000359082 SOX30O94993 753 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 UCHL1P09936 223 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 CAV3P56539 151 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 DPY19L4Q7Z388 723 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 PRR18Q8N4B5 295 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 SCRN2Q96FV2 425 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 IMP4Q96G21 291 aaKnown RBP17.53■□□□□ 0.4
SHANK1-202ENST00000359082 HS6ST2Q96MM7 605 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 VSTM2BA6NLU5 285 aa17.52■□□□□ 0.4
SHANK1-202ENST00000359082 RAC2P15153 192 aa17.52■□□□□ 0.4
SHANK1-202ENST00000359082 OR4D1Q15615 310 aa17.52■□□□□ 0.4
SHANK1-202ENST00000359082 FAM180BQ6P0A1 224 aa17.52■□□□□ 0.4
SHANK1-202ENST00000359082 OR6C4Q8NGE1 309 aa17.52■□□□□ 0.4
SHANK1-202ENST00000359082 CREB3L4Q8TEY5 395 aa17.52■□□□□ 0.4
SHANK1-202ENST00000359082 MTG2Q9H4K7 406 aa17.52■□□□□ 0.4
SHANK1-202ENST00000359082 GPR83Q9NYM4 423 aa17.52■□□□□ 0.4
SHANK1-202ENST00000359082 EPHA1P21709 976 aa17.52■□□□□ 0.4
SHANK1-202ENST00000359082 LUMP51884 338 aaPredicted RBP17.52■□□□□ 0.4
SHANK1-202ENST00000359082 GSCP56915 257 aaPredicted RBP17.52■□□□□ 0.4
SHANK1-202ENST00000359082 RPS26P11Q5JNZ5 115 aaPredicted RBP17.52■□□□□ 0.4
SHANK1-202ENST00000359082 C6orf141Q5SZD1 244 aa17.52■□□□□ 0.4
SHANK1-202ENST00000359082 IL17RCQ8NAC3 791 aa17.52■□□□□ 0.4
SHANK1-202ENST00000359082 HUS1BQ8NHY5 278 aa17.52■□□□□ 0.4
SHANK1-202ENST00000359082 ARL6Q9H0F7 186 aa17.52■□□□□ 0.4
SHANK1-202ENST00000359082 ADAMTS10Q9H324 1103 aa17.52■□□□□ 0.4
SHANK1-202ENST00000359082 FAM118AQ9NWS6 357 aa17.52■□□□□ 0.4
SHANK1-202ENST00000359082 KCNIP1Q9NZI2 227 aa17.52■□□□□ 0.4
SHANK1-202ENST00000359082 NDUFV2P19404 249 aa17.52■□□□□ 0.4
SHANK1-202ENST00000359082 CAMLGP49069 296 aa17.52■□□□□ 0.4
SHANK1-202ENST00000359082 FADDQ13158 208 aa17.52■□□□□ 0.4
SHANK1-202ENST00000359082 IER5LQ5T953 404 aa17.52■□□□□ 0.4
SHANK1-202ENST00000359082 ZC3H14Q6PJT7 736 aaKnown RBP17.52■□□□□ 0.4
SHANK1-202ENST00000359082 OR4K13Q8NH42 304 aa17.52■□□□□ 0.4
SHANK1-202ENST00000359082 OR1A2Q9Y585 309 aa17.52■□□□□ 0.4
SHANK1-202ENST00000359082 TMEM35AQ53FP2 167 aa17.52■□□□□ 0.39
SHANK1-202ENST00000359082 APOBEC3BQ9UH17 382 aaKnown RBP17.52■□□□□ 0.39
SHANK1-202ENST00000359082 IL20RAQ9UHF4 553 aa17.52■□□□□ 0.39
SHANK1-202ENST00000359082 GPR52Q9Y2T5 361 aa17.52■□□□□ 0.39
SHANK1-202ENST00000359082 CAPN3P20807 821 aa17.52■□□□□ 0.39
SHANK1-202ENST00000359082 ART1P52961 327 aa17.52■□□□□ 0.39
SHANK1-202ENST00000359082 TMEM205Q6UW68 189 aa17.52■□□□□ 0.39
SHANK1-202ENST00000359082 USP53Q70EK8 1073 aa17.52■□□□□ 0.39
SHANK1-202ENST00000359082 PLEKHO2Q8TD55 490 aa17.52■□□□□ 0.39
SHANK1-202ENST00000359082 LMF1Q96S06 567 aa17.52■□□□□ 0.39
SHANK1-202ENST00000359082 PHB2Q99623 299 aa17.52■□□□□ 0.39
SHANK1-202ENST00000359082 KCNK13Q9HB14 408 aa17.52■□□□□ 0.39
SHANK1-202ENST00000359082 ATPIF1Q9UII2 106 aa17.52■□□□□ 0.39
SHANK1-202ENST00000359082 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.51■□□□□ 0.39
SHANK1-202ENST00000359082 FMO6PO60774 539 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 DNASE1P24855 282 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 SHC2P98077 582 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 PLGLAQ15195 96 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 HES5Q5TA89 166 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 SLC18B1Q6NT16 456 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 PLBD1Q6P4A8 553 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 RAB7BQ96AH8 199 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 POT1Q9NUX5 634 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 HRH2P25021 359 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 THBS2P35442 1172 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 DOC2AQ14183 400 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 ASRGL1Q7L266 308 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 ZNF689Q96CS4 500 aaPredicted RBP17.51■□□□□ 0.39
SHANK1-202ENST00000359082 C2orf42Q9NWW7 574 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 AP1M2Q9Y6Q5 423 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 PFKMP08237 780 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 FGL1Q08830 312 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 DDX1Q92499 740 aaKnown RBP17.51■□□□□ 0.39
SHANK1-202ENST00000359082 SLC22A31A6NKX4 558 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 SHOXO15266 292 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 SDC3O75056 442 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 OXSR1O95747 527 aaPredicted RBP17.51■□□□□ 0.39
SHANK1-202ENST00000359082 S1PR4O95977 384 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 DIO2Q92813 273 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 CD93Q9NPY3 652 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 EBF1Q9UH73 591 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 MON2Q7Z3U7 1717 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 P04436 131 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 RNH1P13489 461 aaKnown RBP17.51■□□□□ 0.39
SHANK1-202ENST00000359082 ADH6P28332 368 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 RORAP35398 523 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 UBE2NP61088 152 aaKnown RBP17.51■□□□□ 0.39
SHANK1-202ENST00000359082 ZNF761Q86XN6 746 aaPredicted RBP17.51■□□□□ 0.39
SHANK1-202ENST00000359082 CCM2LQ9NUG4 571 aaPredicted RBP17.51■□□□□ 0.39
SHANK1-202ENST00000359082 LIPT1Q9Y234 373 aa17.51■□□□□ 0.39
SHANK1-202ENST00000359082 TMEM14AQ9Y6G1 99 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms