RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 SLC35B4Q969S0 331 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 TMEM203Q969S6 136 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 ZNF582Q96NG8 517 aaPredicted RBP8.1□□□□□ -1.11
RFX3-202ENST00000358730 OR2A14Q96R47 310 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 MACROD1Q9BQ69 325 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 SPATA5L1Q9BVQ7 753 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 FAIM2Q9BWQ8 316 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 PITHD1Q9GZP4 211 aaPredicted RBP8.1□□□□□ -1.11
RFX3-202ENST00000358730 QRSL1Q9H0R6 528 aaKnown RBP8.1□□□□□ -1.11
RFX3-202ENST00000358730 IL23AQ9NPF7 189 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 DIMT1Q9UNQ2 313 aaKnown RBP8.1□□□□□ -1.11
RFX3-202ENST00000358730 TRAPPC4Q9Y296 219 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 IGKV1-8A0A0C4DH67 115 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 LRIT2A6NDA9 550 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 TBC1D3BA6NDS4 549 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 CLEC3AO75596 197 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 CDRT1O95170 752 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 EPPINO95925 133 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 CHRM5P08912 532 aaPredicted RBP8.1□□□□□ -1.11
RFX3-202ENST00000358730 DRD2P14416 443 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 MYL12AP19105 171 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 ETV5P41161 510 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 NR4A2P43354 598 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 ETV1P50549 477 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 TAS2R38P59533 333 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 PSPHP78330 225 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 FUT5Q11128 374 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 SNAPC1Q16533 368 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 GPAT3Q53EU6 434 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 ARMC4Q5T2S8 1044 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 ACSM5Q6NUN0 579 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 NRARPQ7Z6K4 114 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 FAM26EQ8N5C1 309 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 MORN4Q8NDC4 146 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 IL17RDQ8NFM7 739 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 OR8K5Q8NH50 307 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 SUN3Q8TAQ9 357 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 CREB3L4Q8TEY5 395 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 RAB7BQ96AH8 199 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 NELL2Q99435 816 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 GPA33Q99795 319 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 HDAC8Q9BY41 377 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 AICDAQ9GZX7 198 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 HOXD1Q9GZZ0 328 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 KLHL31Q9H511 634 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 EGLN3Q9H6Z9 239 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 TAS2R7Q9NYW3 318 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 FBXW2Q9UKT8 454 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 CARD8Q9Y2G2 431 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 SPIN1Q9Y657 262 aaPredicted RBP8.1□□□□□ -1.11
RFX3-202ENST00000358730 PLD2O14939 933 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 ERI3O43414 337 aaKnown RBP8.1□□□□□ -1.11
RFX3-202ENST00000358730 CCNKO75909 580 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 HMGN2P05204 90 aaKnown RBP8.1□□□□□ -1.11
RFX3-202ENST00000358730 TSPAN19P0C672 248 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 HOXB3P14651 431 aaPredicted RBP8.1□□□□□ -1.11
RFX3-202ENST00000358730 BCL6P41182 706 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 GIPRP48546 466 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 ANXA11P50995 505 aaKnown RBP8.1□□□□□ -1.11
RFX3-202ENST00000358730 SMSP52788 366 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 OR2B6P58173 313 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 TRA2BP62995 288 aaKnown RBP8.1□□□□□ -1.11
RFX3-202ENST00000358730 HNRNPA0Q13151 305 aaKnown RBP8.1□□□□□ -1.11
RFX3-202ENST00000358730 SLC9A5Q14940 896 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 MLF2Q15773 248 aaPredicted RBP8.1□□□□□ -1.11
RFX3-202ENST00000358730 ZNF79Q15937 498 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 ZNF750Q32MQ0 723 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 AGAP6Q5VW22 663 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 RNLSQ5VYX0 342 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 C22orf42Q6IC83 251 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 TMEM107Q6UX40 140 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 CD300LDQ6UXZ3 194 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 IL17RCQ8NAC3 791 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 TEX47Q8TBZ9 253 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 SMG7Q92540 1137 aaKnown RBP8.1□□□□□ -1.11
RFX3-202ENST00000358730 AGAP4Q96P64 663 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 CTRCQ99895 268 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 PLA2G12AQ9BZM1 189 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 C11orf49Q9H6J7 331 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 WDR26Q9H7D7 661 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 SIAEQ9HAT2 523 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 TXNL4BQ9NX01 149 aaKnown RBP8.1□□□□□ -1.11
RFX3-202ENST00000358730 GPR52Q9Y2T5 361 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.1□□□□□ -1.11
RFX3-202ENST00000358730 CMAHPQ9Y471 501 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 IQCMA0A1B0GVH7 501 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 LINC00854A0A1B0GVQ3 168 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 C4orf51C9J302 202 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 MAN2B1O00754 1011 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 LGI1O95970 557 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 C8orf89P0DMQ9 161 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 RAB28P51157 221 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 TAS2R41P59536 307 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 PRDX1Q06830 199 aaKnown RBP8.09□□□□□ -1.11
RFX3-202ENST00000358730 SLAMF1Q13291 335 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 LARS2Q15031 903 aaKnown RBP8.09□□□□□ -1.11
RFX3-202ENST00000358730 FAM78AQ5JUQ0 283 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 KIAA1211LQ6NV74 962 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 C1orf94Q6P1W5 598 aa8.09□□□□□ -1.11
RFX3-202ENST00000358730 BHLHB9Q6PI77 547 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms