RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 IGFBPL1Q8WX77 278 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 UCN3Q969E3 161 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 ESAMQ96AP7 390 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 WDR34Q96EX3 536 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 ZBED6CLQ96FA7 236 aaPredicted RBP14.4□□□□□ -0.1
DDX55-202ENST00000354291 MAPKAP1Q9BPZ7 522 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 C19orf24Q9BVV8 132 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 NMRAL1Q9HBL8 299 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 PRM3Q9NNZ6 103 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 TEX10Q9NXF1 929 aaPredicted RBP14.4□□□□□ -0.1
DDX55-202ENST00000354291 IKBKGQ9Y6K9 419 aa14.4□□□□□ -0.1
DDX55-202ENST00000354291 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.39□□□□□ -0.11
DDX55-202ENST00000354291 A0A1W2PNV4 684 aa14.39□□□□□ -0.11
DDX55-202ENST00000354291 CCNT2O60583 730 aaKnown RBP14.39□□□□□ -0.11
DDX55-202ENST00000354291 TNFSF13O75888 250 aa14.39□□□□□ -0.11
DDX55-202ENST00000354291 FAM157CP0CG43 387 aa14.39□□□□□ -0.11
DDX55-202ENST00000354291 CPN1P15169 458 aa14.39□□□□□ -0.11
DDX55-202ENST00000354291 LOXP28300 417 aaPredicted RBP14.39□□□□□ -0.11
DDX55-202ENST00000354291 CRABP2P29373 138 aa14.39□□□□□ -0.11
DDX55-202ENST00000354291 UGT2B10P36537 528 aa14.39□□□□□ -0.11
DDX55-202ENST00000354291 STT3AP46977 705 aa14.39□□□□□ -0.11
DDX55-202ENST00000354291 KCNJ5P48544 419 aa14.39□□□□□ -0.11
DDX55-202ENST00000354291 RUNX1T1Q06455 604 aa14.39□□□□□ -0.11
DDX55-202ENST00000354291 NAB1Q13506 487 aa14.39□□□□□ -0.11
DDX55-202ENST00000354291 TBCCQ15814 346 aa14.39□□□□□ -0.11
DDX55-202ENST00000354291 FBXO48Q5FWF7 155 aa14.39□□□□□ -0.11
DDX55-202ENST00000354291 SYT10Q6XYQ8 523 aa14.39□□□□□ -0.11
DDX55-202ENST00000354291 TBC1D1Q86TI0 1168 aaPredicted RBP14.39□□□□□ -0.11
DDX55-202ENST00000354291 TAGAPQ8N103 731 aa14.39□□□□□ -0.11
DDX55-202ENST00000354291 CNEP1R1Q8N9A8 125 aa14.39□□□□□ -0.11
DDX55-202ENST00000354291 SRFBP1Q8NEF9 429 aaKnown RBP14.39□□□□□ -0.11
DDX55-202ENST00000354291 FBF1Q8TES7 1133 aa14.39□□□□□ -0.11
DDX55-202ENST00000354291 MARK4Q96L34 752 aa14.39□□□□□ -0.11
DDX55-202ENST00000354291 F2RL3Q96RI0 385 aa14.39□□□□□ -0.11
DDX55-202ENST00000354291 ANGPTL4Q9BY76 406 aa14.39□□□□□ -0.11
DDX55-202ENST00000354291 CD244Q9BZW8 370 aa14.39□□□□□ -0.11
DDX55-202ENST00000354291 WWTR1Q9GZV5 400 aa14.39□□□□□ -0.11
DDX55-202ENST00000354291 PRDM7Q9NQW5 492 aa14.39□□□□□ -0.11
DDX55-202ENST00000354291 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.39□□□□□ -0.11
DDX55-202ENST00000354291 ZNF490Q9ULM2 529 aaPredicted RBP14.39□□□□□ -0.11
DDX55-202ENST00000354291 MED12LQ86YW9 2145 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 CAPN14A8MX76 684 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 C16orf97H3BN30 126 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 FGF17O60258 216 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 POU2F1P14859 743 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 CASP2P42575 452 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 KCNC1P48547 511 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 HERVK_113P63132 956 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 ERVK-8P63133 956 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 IRF8Q02556 426 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 CHIT1Q13231 466 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 ZNF267Q14586 743 aaPredicted RBP14.38□□□□□ -0.11
DDX55-202ENST00000354291 SLMAPQ14BN4 828 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 RPS6KA2Q15349 733 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 ZNF474Q6S9Z5 364 aaPredicted RBP14.38□□□□□ -0.11
DDX55-202ENST00000354291 RNF111Q6ZNA4 994 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 LRRC70Q7Z2Q7 622 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 ZNF572Q7Z3I7 529 aaPredicted RBP14.38□□□□□ -0.11
DDX55-202ENST00000354291 CCDC91Q7Z6B0 441 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 ISCA2Q86U28 154 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 GRAMD2AQ8IUY3 354 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 SPPL2AQ8TCT8 520 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 UBE2E3Q969T4 207 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 STARD4Q96DR4 205 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 PGM2Q96G03 612 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 FBXL20Q96IG2 436 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 ART5Q96L15 291 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 SLC39A3Q9BRY0 314 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 ERVK-6Q9BXR3 956 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 AMBRA1Q9C0C7 1298 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 ROGDIQ9GZN7 287 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 OPN3Q9H1Y3 402 aaPredicted RBP14.38□□□□□ -0.11
DDX55-202ENST00000354291 ALG9Q9H6U8 611 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 LYRM4Q9HD34 91 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 MAPRE3Q9UPY8 281 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 ERVK-19Q9WJR5 959 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.38□□□□□ -0.11
DDX55-202ENST00000354291 SPACA6W5XKT8 324 aa14.38□□□□□ -0.11
DDX55-202ENST00000354291 PRAMEF4O60810 478 aa14.37□□□□□ -0.11
DDX55-202ENST00000354291 TBX6O95947 436 aaPredicted RBP14.37□□□□□ -0.11
DDX55-202ENST00000354291 LTA4HP09960 611 aaKnown RBP14.37□□□□□ -0.11
DDX55-202ENST00000354291 SLC35E2BP0CK96 405 aa14.37□□□□□ -0.11
DDX55-202ENST00000354291 CPN2P22792 545 aa14.37□□□□□ -0.11
DDX55-202ENST00000354291 IDUAP35475 653 aa14.37□□□□□ -0.11
DDX55-202ENST00000354291 CASP3P42574 277 aa14.37□□□□□ -0.11
DDX55-202ENST00000354291 STARP49675 285 aa14.37□□□□□ -0.11
DDX55-202ENST00000354291 SRSF2Q01130 221 aaKnown RBP14.37□□□□□ -0.11
DDX55-202ENST00000354291 OCRLQ01968 901 aa14.37□□□□□ -0.11
DDX55-202ENST00000354291 E2F2Q14209 437 aa14.37□□□□□ -0.11
DDX55-202ENST00000354291 TRADDQ15628 312 aa14.37□□□□□ -0.11
DDX55-202ENST00000354291 PRAMEF9Q5VWM5 478 aa14.37□□□□□ -0.11
DDX55-202ENST00000354291 TIGD3Q6B0B8 471 aa14.37□□□□□ -0.11
DDX55-202ENST00000354291 ENPP6Q6UWR7 440 aa14.37□□□□□ -0.11
DDX55-202ENST00000354291 ZDHHC24Q6UX98 284 aa14.37□□□□□ -0.11
DDX55-202ENST00000354291 ZNF704Q6ZNC4 412 aaPredicted RBP14.37□□□□□ -0.11
DDX55-202ENST00000354291 C22orf34Q6ZV56 151 aa14.37□□□□□ -0.11
DDX55-202ENST00000354291 P4HA3Q7Z4N8 544 aa14.37□□□□□ -0.11
DDX55-202ENST00000354291 VN1R5Q7Z5H4 357 aa14.37□□□□□ -0.11
DDX55-202ENST00000354291 ADGRE4PQ86SQ3 457 aa14.37□□□□□ -0.11
DDX55-202ENST00000354291 TRIM42Q8IWZ5 723 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms