RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 ASPSCR1Q9BZE9 553 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 TMEM38AQ9H6F2 299 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 DDX31Q9H8H2 851 aaKnown RBP7.73□□□□□ -1.17
CD44-205ENST00000352818 NEUROD4Q9HD90 331 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 SLAMF7Q9NQ25 335 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 SLC39A1Q9NY26 324 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 TAS2R9Q9NYW1 312 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 TAS2R7Q9NYW3 318 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 EHD3Q9NZN3 535 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 OR6C2Q9NZP2 312 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 SH3BP4Q9P0V3 963 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 PCDHGB4Q9UN71 923 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 PCDHGA9Q9Y5G4 932 aaKnown RBP7.73□□□□□ -1.17
CD44-205ENST00000352818 KLF2Q9Y5W3 355 aaPredicted RBP7.73□□□□□ -1.17
CD44-205ENST00000352818 COLEC10Q9Y6Z7 277 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 ABCA4P78363 2273 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 A0A0A6YYD5 115 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 IGKV1-8A0A0C4DH67 115 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 A6NCN8 305 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 PDZK1P1A8MUH7 402 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 B4E171 279 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 H3BNH8 94 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 TNFRSF21O75509 655 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 FKBP9O95302 570 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 H6PDO95479 791 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 KRT75O95678 551 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 CST1P01037 141 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 ALPLP05186 524 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 IL3P08700 152 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 THRBP10828 461 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 COX6B1P14854 86 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 PNLIPP16233 465 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 GLB1P16278 677 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 CMPK1P30085 196 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 GRK3P35626 688 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 SOX11P35716 441 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 TSPAN7P41732 249 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 RPL5P46777 297 aaKnown RBP7.72□□□□□ -1.17
CD44-205ENST00000352818 MAPK12P53778 367 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 OR1D5P58170 312 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 HBA1P69905 142 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 CHAF1BQ13112 559 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 HEPACAMQ14CZ8 416 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 MLC1Q15049 377 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 SF1Q15637 639 aaKnown RBP7.72□□□□□ -1.17
CD44-205ENST00000352818 ZNF630Q2M218 657 aaPredicted RBP7.72□□□□□ -1.17
CD44-205ENST00000352818 MPEG1Q2M385 716 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 RFX4Q33E94 735 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 PLEKHN1Q494U1 663 aaPredicted RBP7.72□□□□□ -1.17
CD44-205ENST00000352818 LIN52Q52LA3 116 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 CYBRD1Q53TN4 286 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 ZC3H12BQ5HYM0 836 aaKnown RBP7.72□□□□□ -1.17
CD44-205ENST00000352818 CCNYL2Q5T2Q4 361 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 GCNT6Q5T4J0 391 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 ZNF425Q6IV72 752 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 KRT80Q6KB66 452 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 ANKRD26P1Q6NSI1 321 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 OGFOD3Q6PK18 319 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 CCDC80Q76M96 950 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 PATL1Q86TB9 770 aaKnown RBP7.72□□□□□ -1.17
CD44-205ENST00000352818 ZDHHC13Q8IUH4 622 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 ZDHHC21Q8IVQ6 265 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 OR2L3Q8NG85 312 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 PSMA8Q8TAA3 256 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 ITLN2Q8WWU7 325 aaPredicted RBP7.72□□□□□ -1.17
CD44-205ENST00000352818 PNPLA2Q96AD5 504 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 TM4SF18Q96CE8 201 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 NRBF2Q96F24 287 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 RMND5BQ96G75 393 aaPredicted RBP7.72□□□□□ -1.17
CD44-205ENST00000352818 RBM4BQ9BQ04 359 aaKnown RBP7.72□□□□□ -1.17
CD44-205ENST00000352818 SLC35A5Q9BS91 424 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 ACAT2Q9BWD1 397 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 RBM4Q9BWF3 364 aaKnown RBP7.72□□□□□ -1.17
CD44-205ENST00000352818 EPS8L2Q9H6S3 715 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 SLC6A20Q9NP91 592 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 MRPS30Q9NP92 439 aaKnown RBP7.72□□□□□ -1.17
CD44-205ENST00000352818 IL1RAPQ9NPH3 570 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 LHX9Q9NQ69 397 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 ACSS1Q9NUB1 689 aaPredicted RBP7.72□□□□□ -1.17
CD44-205ENST00000352818 IMP3Q9NV31 184 aaKnown RBP7.72□□□□□ -1.17
CD44-205ENST00000352818 TRNAU1APQ9NX07 287 aaKnown RBP7.72□□□□□ -1.17
CD44-205ENST00000352818 TUBA8Q9NY65 449 aaPredicted RBP7.72□□□□□ -1.17
CD44-205ENST00000352818 TMEM9Q9P0T7 183 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 IFT80Q9P2H3 777 aaPredicted RBP7.72□□□□□ -1.17
CD44-205ENST00000352818 MYRFQ9Y2G1 1151 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 TMEM184BQ9Y519 407 aaPredicted RBP7.72□□□□□ -1.17
CD44-205ENST00000352818 V9GYQ6 96 aa7.72□□□□□ -1.17
CD44-205ENST00000352818 HEATR5BQ9P2D3 2071 aa7.71□□□□□ -1.17
CD44-205ENST00000352818 A0A1W2PRB8 838 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 CDC14CA4D256 554 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 LRIT2A6NDA9 550 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 OR52A4PA6NMU1 304 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 H7BY64 318 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 C19orf84I3L1E1 186 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 SAP18O00422 153 aaKnown RBP7.71□□□□□ -1.18
CD44-205ENST00000352818 OR1F1O43749 312 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 SH3BGRLO75368 114 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 STK17BO94768 372 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 CPNE6O95741 557 aa7.71□□□□□ -1.18
CD44-205ENST00000352818 C6orf47O95873 294 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms