RNA–Protein interactions for RNA: ENST00000345317.6

SKAP2-201, Transcript of src kinase associated phosphoprotein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP2, Length 3,998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-201ENST00000345317 REM1O75628 298 aa8.19□□□□□ -1.1
SKAP2-201ENST00000345317 OR1D4P47884 311 aa8.19□□□□□ -1.1
SKAP2-201ENST00000345317 HNRNPKP61978 463 aaKnown RBP eCLIP8.19□□□□□ -1.1
SKAP2-201ENST00000345317 PPP1CAP62136 330 aa8.19□□□□□ -1.1
SKAP2-201ENST00000345317 TPRG1LQ5T0D9 272 aa8.19□□□□□ -1.1
SKAP2-201ENST00000345317 VASH1Q7L8A9 365 aaPredicted RBP8.19□□□□□ -1.1
SKAP2-201ENST00000345317 ZZZ3Q8IYH5 903 aa8.19□□□□□ -1.1
SKAP2-201ENST00000345317 CHCHD4Q8N4Q1 142 aa8.19□□□□□ -1.1
SKAP2-201ENST00000345317 STON2Q8WXE9 905 aa8.19□□□□□ -1.1
SKAP2-201ENST00000345317 ATOH1Q92858 354 aaPredicted RBP8.19□□□□□ -1.1
SKAP2-201ENST00000345317 MOV10Q9HCE1 1003 aaKnown RBP8.19□□□□□ -1.1
SKAP2-201ENST00000345317 TM9SF3Q9HD45 589 aa8.19□□□□□ -1.1
SKAP2-201ENST00000345317 MYNNQ9NPC7 610 aa8.19□□□□□ -1.1
SKAP2-201ENST00000345317 CLN6Q9NWW5 311 aa8.19□□□□□ -1.1
SKAP2-201ENST00000345317 PHF11Q9UIL8 331 aa8.19□□□□□ -1.1
SKAP2-201ENST00000345317 ANKRD36A6QL64 1941 aa8.19□□□□□ -1.1
SKAP2-201ENST00000345317 RNASET2O00584 256 aaKnown RBP8.18□□□□□ -1.1
SKAP2-201ENST00000345317 OR2B3O76000 313 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 BMP7P18075 431 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 PAICSP22234 425 aaKnown RBP8.18□□□□□ -1.1
SKAP2-201ENST00000345317 ATP5A1P25705 553 aaKnown RBP8.18□□□□□ -1.1
SKAP2-201ENST00000345317 ZC3H12BQ5HYM0 836 aaKnown RBP8.18□□□□□ -1.1
SKAP2-201ENST00000345317 SLC35F1Q5T1Q4 408 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 ALDH16A1Q8IZ83 802 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 LRRC25Q8N386 305 aaPredicted RBP8.18□□□□□ -1.1
SKAP2-201ENST00000345317 OR8J2Q8NGG1 315 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 ZNF563Q8TA94 476 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 TEX47Q8TBZ9 253 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 CHPT1Q8WUD6 406 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 DGAT2Q96PD7 388 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 WDR12Q9GZL7 423 aaKnown RBP8.18□□□□□ -1.1
SKAP2-201ENST00000345317 IRF2BPLQ9H1B7 796 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 TBC1D17Q9HA65 648 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 RLIMQ9NVW2 624 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 NLGN3Q9NZ94 848 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 DNAJC27Q9NZQ0 273 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 LRIT1Q9P2V4 623 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 NLRC5Q86WI3 1866 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 LRIT2A6NDA9 550 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 FOXE1O00358 373 aaPredicted RBP8.18□□□□□ -1.1
SKAP2-201ENST00000345317 MBTPS2O43462 519 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 APBB3O95704 486 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 SRFP11831 508 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 NR4A2P43354 598 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 RPP38P78345 283 aaKnown RBP8.18□□□□□ -1.1
SKAP2-201ENST00000345317 RAPSNQ13702 412 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 CKAP5Q14008 2032 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 KCNAB1Q14722 419 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 NPTX1Q15818 432 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 GAB4Q2WGN9 574 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 LEXMQ3ZCV2 418 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 ARHGAP40Q5TG30 622 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 KIAA0907Q7Z7F0 614 aaPredicted RBP8.18□□□□□ -1.1
SKAP2-201ENST00000345317 MSRB3Q8IXL7 192 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 WDR36Q8NI36 951 aaKnown RBP8.18□□□□□ -1.1
SKAP2-201ENST00000345317 ZFP90Q8TF47 636 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 UBE2FQ969M7 185 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 EFHD2Q96C19 240 aaPredicted RBP8.18□□□□□ -1.1
SKAP2-201ENST00000345317 TEFMQ96QE5 360 aaKnown RBP8.18□□□□□ -1.1
SKAP2-201ENST00000345317 TBX5Q99593 518 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 COPS4Q9BT78 406 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 PDE7BQ9NP56 450 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 FAM118AQ9NWS6 357 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 ZNF624Q9P2J8 865 aaPredicted RBP8.18□□□□□ -1.1
SKAP2-201ENST00000345317 DHCR7Q9UBM7 475 aaKnown RBP8.18□□□□□ -1.1
SKAP2-201ENST00000345317 BTNL2Q9UIR0 455 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 ERGIC3Q9Y282 383 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 SIT1Q9Y3P8 196 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 H3BNH8 94 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 TNFRSF10AO00220 468 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 MYL12BO14950 172 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 ANKRD28O15084 1053 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 RGS10O43665 173 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 ATE1O95260 518 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 CHRNB1P11230 501 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 TCF3P15923 654 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 MAP2K4P45985 399 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 GSTM5P46439 218 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 FADDQ13158 208 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 SMN1Q16637 294 aaKnown RBP8.18□□□□□ -1.1
SKAP2-201ENST00000345317 TMEM35AQ53FP2 167 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 USP30Q70CQ3 517 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 NLRP8Q86W28 1048 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 OR51V1Q9H2C8 321 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 GLIPR2Q9H4G4 154 aa8.18□□□□□ -1.1
SKAP2-201ENST00000345317 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.18□□□□□ -1.1
SKAP2-201ENST00000345317 OR5K4A6NMS3 321 aa8.17□□□□□ -1.1
SKAP2-201ENST00000345317 CENPXA8MT69 81 aa8.17□□□□□ -1.1
SKAP2-201ENST00000345317 GPR89AB7ZAQ6 455 aa8.17□□□□□ -1.1
SKAP2-201ENST00000345317 TMEM150CB9EJG8 249 aa8.17□□□□□ -1.1
SKAP2-201ENST00000345317 YY2O15391 372 aa8.17□□□□□ -1.1
SKAP2-201ENST00000345317 LAMTOR5O43504 91 aa8.17□□□□□ -1.1
SKAP2-201ENST00000345317 FHP07954 510 aa8.17□□□□□ -1.1
SKAP2-201ENST00000345317 GPR89BP0CG08 455 aa8.17□□□□□ -1.1
SKAP2-201ENST00000345317 PKLRP30613 574 aa8.17□□□□□ -1.1
SKAP2-201ENST00000345317 LTBRP36941 435 aa8.17□□□□□ -1.1
SKAP2-201ENST00000345317 IFNGR2P38484 337 aa8.17□□□□□ -1.1
SKAP2-201ENST00000345317 BNC1Q01954 994 aa8.17□□□□□ -1.1
SKAP2-201ENST00000345317 SRSF5Q13243 272 aaKnown RBP8.17□□□□□ -1.1
SKAP2-201ENST00000345317 FRMPD2BQ6IN97 320 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms