RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 MRPL48Q96GC5 212 aaKnown RBP11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 SLC46A2Q9BY10 475 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 WDR26Q9H7D7 661 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 PAK6Q9NQU5 681 aaPredicted RBP11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 CCL26Q9Y258 94 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 GTPBP1O00178 669 aaKnown RBP11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 PSMD9O00233 223 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 KDM4BO94953 1096 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 HTR1AP08908 422 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 PRR35P0CG20 571 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 ZNF10P21506 573 aaPredicted RBP11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 ACTR1BP42025 376 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 ACTR1AP61163 376 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 DSG2Q14126 1118 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 HYAL4Q2M3T9 481 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 PODNL1Q6PEZ8 512 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 FAM220AQ7Z4H9 259 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 ADGRD2Q7Z7M1 963 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 PDZD3Q86UT5 571 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 CPOQ8IVL8 374 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 SLAIN1Q8ND83 568 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 ANKK1Q8NFD2 765 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 TANKQ92844 425 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 CCDC32Q9BV29 185 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 ALOXE3Q9BYJ1 711 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 AKIP1Q9NQ31 210 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 DMRT3Q9NQL9 472 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 TMEM45AQ9NWC5 275 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 CUEDC1Q9NWM3 386 aaPredicted RBP11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 UBR3Q6ZT12 1888 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 SSC5DA1L4H1 1573 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 XIRP1Q702N8 1843 aaKnown RBP11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 PTPRZ1P23471 2315 aaPredicted RBP11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 H7C0S8 307 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 SLC16A5O15375 505 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 HNRNPFP52597 415 aaKnown RBP11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 TRAM2Q15035 370 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 DEFB134Q4QY38 66 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 DNAJC5GQ8N7S2 189 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 SRFBP1Q8NEF9 429 aaKnown RBP11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 SLC38A5Q8WUX1 472 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 CAMK1GQ96NX5 476 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 CD180Q99467 661 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 DPH7Q9BTV6 452 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 BTBD1Q9H0C5 482 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 SNX11Q9Y5W9 270 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 HMGN1P05114 100 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 HMGN2P05204 90 aaKnown RBP11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 GYPBP06028 91 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 CSF2RAP15509 400 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 CMPK1P30085 196 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 AHRP35869 848 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 EIF4HQ15056 248 aaKnown RBP11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 FIGNL1Q6PIW4 674 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 ZNF438Q7Z4V0 828 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 CBARPQ8N350 705 aaPredicted RBP11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 VWA5B2Q8N398 1253 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 CHCHD4Q8N4Q1 142 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 OVCA2Q8WZ82 227 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 ZNF689Q96CS4 500 aaPredicted RBP11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 OTUB2Q96DC9 234 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 NUDT15Q9NV35 164 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 LOC100509620A0A075B734 347 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 SH3D21A4FU49 640 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 OR52A4PA6NMU1 304 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 WASHC1A8K0Z3 465 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 RNASET2O00584 256 aaKnown RBP11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 LYRM1O43325 122 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 SSX4O60224 188 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 ADAMTS4O75173 837 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 CDC123O75794 336 aaPredicted RBP11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 C6P13671 934 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 CTSEP14091 401 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 GIPRP48546 466 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 WNT4P56705 351 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 CST9Q5W186 159 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 SLC8B1Q6J4K2 584 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 WASH2PQ6VEQ5 465 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 OR8J2Q8NGG1 315 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 OR52P1PQ8NH57 321 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 ADAMTS16Q8TE57 1224 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 NDC1Q9BTX1 674 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 CREBZFQ9NS37 354 aa11.79□□□□□ -0.52
SNRNP48-201ENST00000342415 MEN1O00255 615 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 ASGR2P07307 311 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 ADH5P11766 374 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 SIM1P81133 766 aaPredicted RBP11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 SLC25A25Q6KCM7 469 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 YIPF7Q8N8F6 280 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 NUP43Q8NFH3 380 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 RFT1Q96AA3 541 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 EFHD2Q96C19 240 aaPredicted RBP11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 SPACA7Q96KW9 195 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 SRMSQ9H3Y6 488 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 CXorf36Q9H7Y0 433 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 TRIM36Q9NQ86 728 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 PLSCR3Q9NRY6 295 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 PRELID1Q9Y255 219 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 GRIP1Q9Y3R0 1128 aa11.78□□□□□ -0.52
SNRNP48-201ENST00000342415 A0A1B0GW55 424 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 253.3 ms