RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 SLC37A3Q8NCC5 494 aa21.15■□□□□ 0.98
TRIM28-202ENST00000341753 NIPAL2Q9H841 368 aa21.15■□□□□ 0.98
TRIM28-202ENST00000341753 FBXW2Q9UKT8 454 aa21.15■□□□□ 0.98
TRIM28-202ENST00000341753 C2orf92A0A1B0GVN3 265 aa21.15■□□□□ 0.98
TRIM28-202ENST00000341753 DVL2O14641 736 aa21.15■□□□□ 0.98
TRIM28-202ENST00000341753 FAM157BP0CG42 384 aa21.15■□□□□ 0.98
TRIM28-202ENST00000341753 CCL5P13501 91 aa21.15■□□□□ 0.98
TRIM28-202ENST00000341753 GIPRP48546 466 aa21.15■□□□□ 0.98
TRIM28-202ENST00000341753 AGFG1P52594 562 aaKnown RBP21.15■□□□□ 0.98
TRIM28-202ENST00000341753 PPP3R1P63098 170 aa21.15■□□□□ 0.98
TRIM28-202ENST00000341753 MAP4K2Q12851 820 aa21.15■□□□□ 0.98
TRIM28-202ENST00000341753 SPDYE7PQ495Y7 208 aa21.15■□□□□ 0.98
TRIM28-202ENST00000341753 DDX53Q86TM3 631 aaKnown RBP21.15■□□□□ 0.98
TRIM28-202ENST00000341753 LIX1LQ8IVB5 337 aa21.15■□□□□ 0.98
TRIM28-202ENST00000341753 FAM26EQ8N5C1 309 aa21.15■□□□□ 0.98
TRIM28-202ENST00000341753 UFD1Q92890 307 aa21.15■□□□□ 0.98
TRIM28-202ENST00000341753 MTG2Q9H4K7 406 aa21.15■□□□□ 0.98
TRIM28-202ENST00000341753 SEC14L3Q9UDX4 400 aa21.15■□□□□ 0.98
TRIM28-202ENST00000341753 OBSL1O75147 1896 aa21.15■□□□□ 0.98
TRIM28-202ENST00000341753 HCN1O60741 890 aa21.14■□□□□ 0.98
TRIM28-202ENST00000341753 SCO1O75880 301 aa21.14■□□□□ 0.98
TRIM28-202ENST00000341753 PTGER1P34995 402 aa21.14■□□□□ 0.98
TRIM28-202ENST00000341753 ANKRD33Q7Z3H0 272 aa21.14■□□□□ 0.98
TRIM28-202ENST00000341753 OR8H1Q8NGG4 311 aa21.14■□□□□ 0.98
TRIM28-202ENST00000341753 KIAA1143Q96AT1 154 aaPredicted RBP21.14■□□□□ 0.98
TRIM28-202ENST00000341753 TCEAL4Q96EI5 215 aa21.14■□□□□ 0.98
TRIM28-202ENST00000341753 NRTNQ99748 197 aa21.14■□□□□ 0.98
TRIM28-202ENST00000341753 ACAT2Q9BWD1 397 aa21.14■□□□□ 0.98
TRIM28-202ENST00000341753 PRR14Q9BWN1 585 aa21.14■□□□□ 0.98
TRIM28-202ENST00000341753 ZSCAN32Q9NX65 697 aa21.14■□□□□ 0.98
TRIM28-202ENST00000341753 LATS1O95835 1130 aa21.14■□□□□ 0.97
TRIM28-202ENST00000341753 MNX1P50219 401 aaPredicted RBP21.14■□□□□ 0.97
TRIM28-202ENST00000341753 GAS1P54826 345 aa21.14■□□□□ 0.97
TRIM28-202ENST00000341753 MANFP55145 182 aaKnown RBP21.14■□□□□ 0.97
TRIM28-202ENST00000341753 CLDN20P56880 219 aa21.14■□□□□ 0.97
TRIM28-202ENST00000341753 MRPL28Q13084 256 aaKnown RBP21.14■□□□□ 0.97
TRIM28-202ENST00000341753 SYPL1Q16563 259 aa21.14■□□□□ 0.97
TRIM28-202ENST00000341753 TIGD3Q6B0B8 471 aa21.14■□□□□ 0.97
TRIM28-202ENST00000341753 SLC30A8Q8IWU4 369 aa21.14■□□□□ 0.97
TRIM28-202ENST00000341753 OR4K5Q8NGD3 323 aa21.14■□□□□ 0.97
TRIM28-202ENST00000341753 SORCS1Q8WY21 1168 aa21.14■□□□□ 0.97
TRIM28-202ENST00000341753 ATF6BQ99941 703 aa21.14■□□□□ 0.97
TRIM28-202ENST00000341753 CFHR5Q9BXR6 569 aa21.14■□□□□ 0.97
TRIM28-202ENST00000341753 POLDIP3Q9BY77 421 aaKnown RBP21.14■□□□□ 0.97
TRIM28-202ENST00000341753 GSTK1Q9Y2Q3 226 aa21.14■□□□□ 0.97
TRIM28-202ENST00000341753 PPIL1Q9Y3C6 166 aa21.14■□□□□ 0.97
TRIM28-202ENST00000341753 DYRK1BQ9Y463 629 aa21.14■□□□□ 0.97
TRIM28-202ENST00000341753 PLXND1Q9Y4D7 1925 aa21.14■□□□□ 0.97
TRIM28-202ENST00000341753 KIAA1671Q9BY89 1806 aa21.14■□□□□ 0.97
TRIM28-202ENST00000341753 A0A1B0GVC2 190 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 A6NIN4 97 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 GTPBP1O00178 669 aaKnown RBP21.13■□□□□ 0.97
TRIM28-202ENST00000341753 GNRH1P01148 92 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 LRG1P02750 347 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 SDHBP21912 280 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 ASB18Q6ZVZ8 466 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 HTR3DQ70Z44 454 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 OR5D16Q8NGK9 328 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 FIBINQ8TAL6 211 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 PHF21AQ96BD5 680 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 TMEM43Q9BTV4 400 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 A4GNTQ9UNA3 340 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 CD8B2A6NJW9 211 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 LEUTXA8MZ59 168 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 NEDD8-MDP1E9PL57 170 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 SLC28A2O43868 658 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 C8AP07357 584 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 C1GALT1C1LP0DN25 315 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 CD8BP10966 210 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 MAB21L1Q13394 359 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 CLEC12AQ5QGZ9 265 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 TMEM220Q6QAJ8 160 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 MARCH9Q86YJ5 346 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 DNAJC5GQ8N7S2 189 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 DUSP18Q8NEJ0 188 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 TEFMQ96QE5 360 aaKnown RBP21.13■□□□□ 0.97
TRIM28-202ENST00000341753 NARFLQ9H6Q4 476 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 KCNK12Q9HB15 430 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 INMT-MINDY4F8WBC2 141 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 PROM1O43490 865 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 SRPRAP08240 638 aaKnown RBP21.13■□□□□ 0.97
TRIM28-202ENST00000341753 TMEM163Q8TC26 289 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 ZNF354BQ96LW1 612 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 MED18Q9BUE0 208 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 COQ3Q9NZJ6 369 aa21.13■□□□□ 0.97
TRIM28-202ENST00000341753 RNLSQ5VYX0 342 aa21.12■□□□□ 0.97
TRIM28-202ENST00000341753 FAM205BPQ63HN1 556 aa21.12■□□□□ 0.97
TRIM28-202ENST00000341753 FAM92BQ6ZTR7 304 aa21.12■□□□□ 0.97
TRIM28-202ENST00000341753 C6orf120Q7Z4R8 191 aa21.12■□□□□ 0.97
TRIM28-202ENST00000341753 UCN3Q969E3 161 aa21.12■□□□□ 0.97
TRIM28-202ENST00000341753 FOPNLQ96NB1 174 aa21.12■□□□□ 0.97
TRIM28-202ENST00000341753 IL17FQ96PD4 163 aa21.12■□□□□ 0.97
TRIM28-202ENST00000341753 HDHD2Q9H0R4 259 aa21.12■□□□□ 0.97
TRIM28-202ENST00000341753 ATP13A2Q9NQ11 1180 aa21.12■□□□□ 0.97
TRIM28-202ENST00000341753 CLCA2Q9UQC9 943 aa21.12■□□□□ 0.97
TRIM28-202ENST00000341753 HMGN4O00479 90 aa21.12■□□□□ 0.97
TRIM28-202ENST00000341753 ORC5O43913 435 aa21.12■□□□□ 0.97
TRIM28-202ENST00000341753 CH25HO95992 272 aa21.12■□□□□ 0.97
TRIM28-202ENST00000341753 KCNJ5P48544 419 aa21.12■□□□□ 0.97
TRIM28-202ENST00000341753 EVX1P49640 407 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms