RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 GOLGA6L10A0A0M3HER8 536 aa9.78□□□□□ -0.84
ATXN3-201ENST00000340660 C5orf60A6NFR6 353 aa9.78□□□□□ -0.84
ATXN3-201ENST00000340660 CCNDBP1O95273 360 aa9.78□□□□□ -0.84
ATXN3-201ENST00000340660 STAMBPO95630 424 aa9.78□□□□□ -0.84
ATXN3-201ENST00000340660 MPIG6BO95866 241 aa9.78□□□□□ -0.84
ATXN3-201ENST00000340660 PNPP00491 289 aa9.78□□□□□ -0.84
ATXN3-201ENST00000340660 OR56A5P0C7T3 313 aa9.78□□□□□ -0.84
ATXN3-201ENST00000340660 ALOX12P18054 663 aa9.78□□□□□ -0.84
ATXN3-201ENST00000340660 GIFP27352 417 aa9.78□□□□□ -0.84
ATXN3-201ENST00000340660 GCKP35557 465 aa9.78□□□□□ -0.84
ATXN3-201ENST00000340660 SLC25A11Q02978 314 aaKnown RBP9.78□□□□□ -0.84
ATXN3-201ENST00000340660 MAP4K2Q12851 820 aa9.78□□□□□ -0.84
ATXN3-201ENST00000340660 ELAVL1Q15717 326 aaKnown RBP9.78□□□□□ -0.84
ATXN3-201ENST00000340660 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.78□□□□□ -0.84
ATXN3-201ENST00000340660 UGT2A3Q6UWM9 527 aa9.78□□□□□ -0.84
ATXN3-201ENST00000340660 TMEM132CQ8N3T6 1108 aa9.78□□□□□ -0.84
ATXN3-201ENST00000340660 PPFIBP2Q8ND30 876 aa9.78□□□□□ -0.84
ATXN3-201ENST00000340660 STEAP2Q8NFT2 490 aa9.78□□□□□ -0.84
ATXN3-201ENST00000340660 SLC13A3Q8WWT9 602 aa9.78□□□□□ -0.84
ATXN3-201ENST00000340660 SERINC2Q96SA4 455 aa9.78□□□□□ -0.84
ATXN3-201ENST00000340660 TBX15Q96SF7 602 aa9.78□□□□□ -0.84
ATXN3-201ENST00000340660 CLCA3PQ9Y6N3 262 aa9.78□□□□□ -0.84
ATXN3-201ENST00000340660 HECTD4Q9Y4D8 3996 aa9.77□□□□□ -0.84
ATXN3-201ENST00000340660 BICDL2A1A5D9 508 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 K7EIL1 84 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 PSMD12O00232 456 aaPredicted RBP9.77□□□□□ -0.85
ATXN3-201ENST00000340660 LCMT2O60294 686 aaKnown RBP9.77□□□□□ -0.85
ATXN3-201ENST00000340660 OR1I1O60431 355 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 SNX4O95219 450 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 AGTP01019 485 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 MSMBP08118 114 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 RNH1P13489 461 aaKnown RBP9.77□□□□□ -0.85
ATXN3-201ENST00000340660 CHRM3P20309 590 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 FOXN2P32314 431 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 HNRNPFP52597 415 aaKnown RBP9.77□□□□□ -0.85
ATXN3-201ENST00000340660 CLCQ05315 142 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 SPOCK1Q08629 439 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 MSLNQ13421 630 aaPredicted RBP9.77□□□□□ -0.85
ATXN3-201ENST00000340660 NTRK2Q16620 822 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 PHKG1Q16816 387 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 BBS9Q3SYG4 887 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 TEX44Q53QW1 395 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.77□□□□□ -0.85
ATXN3-201ENST00000340660 TIGD3Q6B0B8 471 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 DOK3Q7L591 496 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 TEX29Q8N6K0 151 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 MORN4Q8NDC4 146 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 TMEM52Q8NDY8 209 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 FNDC9Q8TBE3 224 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 SLC2A12Q8TD20 617 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 HSD17B8Q92506 261 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 DVL3Q92997 716 aaPredicted RBP9.77□□□□□ -0.85
ATXN3-201ENST00000340660 PPP1R14AQ96A00 147 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 MTBPQ96DY7 904 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 MAP6Q96JE9 813 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 DNAJC1Q96KC8 554 aaKnown RBP9.77□□□□□ -0.85
ATXN3-201ENST00000340660 HBEGFQ99075 208 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 GCM1Q9NP62 436 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 ABCF3Q9NUQ8 709 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 RSPH14Q9UHP6 348 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 R3HDM2Q9Y2K5 976 aaKnown RBP9.77□□□□□ -0.85
ATXN3-201ENST00000340660 PMF1-BGLAPU3KQ54 211 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 ARFGEF3Q5TH69 2177 aa9.77□□□□□ -0.85
ATXN3-201ENST00000340660 STARD9Q9P2P6 4700 aa9.76□□□□□ -0.85
ATXN3-201ENST00000340660 IQCF5A8MTL0 148 aa9.76□□□□□ -0.85
ATXN3-201ENST00000340660 PRSS23O95084 383 aa9.76□□□□□ -0.85
ATXN3-201ENST00000340660 SELEP16581 610 aa9.76□□□□□ -0.85
ATXN3-201ENST00000340660 TNNT3P45378 269 aaPredicted RBP9.76□□□□□ -0.85
ATXN3-201ENST00000340660 CLDN15P56746 228 aa9.76□□□□□ -0.85
ATXN3-201ENST00000340660 SLC37A1P57057 533 aa9.76□□□□□ -0.85
ATXN3-201ENST00000340660 ABATP80404 500 aa9.76□□□□□ -0.85
ATXN3-201ENST00000340660 ITIH4Q14624 930 aa9.76□□□□□ -0.85
ATXN3-201ENST00000340660 OLFML2AQ68BL7 652 aa9.76□□□□□ -0.85
ATXN3-201ENST00000340660 NLRC3Q7RTR2 1065 aa9.76□□□□□ -0.85
ATXN3-201ENST00000340660 C9orf40Q8IXQ3 194 aa9.76□□□□□ -0.85
ATXN3-201ENST00000340660 DND1Q8IYX4 353 aaKnown RBP9.76□□□□□ -0.85
ATXN3-201ENST00000340660 SLC15A4Q8N697 577 aa9.76□□□□□ -0.85
ATXN3-201ENST00000340660 OR6K3Q8NGY3 331 aa9.76□□□□□ -0.85
ATXN3-201ENST00000340660 NUBPLQ8TB37 319 aa9.76□□□□□ -0.85
ATXN3-201ENST00000340660 SGCDQ92629 289 aa9.76□□□□□ -0.85
ATXN3-201ENST00000340660 TMEM41AQ96HV5 264 aa9.76□□□□□ -0.85
ATXN3-201ENST00000340660 EBNA1BP2Q99848 306 aaKnown RBP9.76□□□□□ -0.85
ATXN3-201ENST00000340660 TRMOQ9BU70 441 aa9.76□□□□□ -0.85
ATXN3-201ENST00000340660 OR2B2Q9GZK3 357 aa9.76□□□□□ -0.85
ATXN3-201ENST00000340660 TEX10Q9NXF1 929 aaPredicted RBP9.76□□□□□ -0.85
ATXN3-201ENST00000340660 WWOXQ9NZC7 414 aa9.76□□□□□ -0.85
ATXN3-201ENST00000340660 NPAP1Q9NZP6 1156 aa9.76□□□□□ -0.85
ATXN3-201ENST00000340660 A0A1B0GUS0 222 aa9.75□□□□□ -0.85
ATXN3-201ENST00000340660 GOLGA6L10A6NI86 522 aa9.75□□□□□ -0.85
ATXN3-201ENST00000340660 GOLGA6L19H0YKK7 550 aa9.75□□□□□ -0.85
ATXN3-201ENST00000340660 NRDCO43847 1150 aa9.75□□□□□ -0.85
ATXN3-201ENST00000340660 GCM2O75603 506 aaPredicted RBP9.75□□□□□ -0.85
ATXN3-201ENST00000340660 SNUPNO95149 360 aaKnown RBP9.75□□□□□ -0.85
ATXN3-201ENST00000340660 SLC35G6P0C7Q6 338 aa9.75□□□□□ -0.85
ATXN3-201ENST00000340660 ZNF888P0CJ79 500 aaPredicted RBP9.75□□□□□ -0.85
ATXN3-201ENST00000340660 PCGF2P35227 344 aa9.75□□□□□ -0.85
ATXN3-201ENST00000340660 HLXQ14774 488 aaPredicted RBP9.75□□□□□ -0.85
ATXN3-201ENST00000340660 CAPN13Q6MZZ7 669 aaPredicted RBP9.75□□□□□ -0.85
ATXN3-201ENST00000340660 RBMS3Q6XE24 437 aaKnown RBP9.75□□□□□ -0.85
ATXN3-201ENST00000340660 CLNKQ7Z7G1 428 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms