RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 NOTOA8MTQ0 251 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 FAAHO00519 579 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 SLC30A4O14863 429 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 DPM1O60762 260 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 DDCP20711 480 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 CXCR2P25025 360 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 IRS1P35568 1242 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 HMGA2P52926 109 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 MFSD4BQ5TF39 518 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 KHDRBS2Q5VWX1 349 aaKnown RBP13.61□□□□□ -0.23
CPSF7-201ENST00000340437 ZNF438Q7Z4V0 828 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 MARCH9Q86YJ5 346 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 SFTPA1Q8IWL2 248 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 PLA2G15Q8NCC3 412 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 ZG16BQ96DA0 208 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 CXorf40BQ96DE9 158 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 MIXL1Q9H2W2 232 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 SLC25A19Q9HC21 320 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 IMP3Q9NV31 184 aaKnown RBP13.61□□□□□ -0.23
CPSF7-201ENST00000340437 SLC23A2Q9UGH3 650 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 PLXND1Q9Y4D7 1925 aa13.61□□□□□ -0.23
CPSF7-201ENST00000340437 CACNA1CQ13936 2221 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 LOC102723532A0A0G2JNH3 316 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 HYKKA2RU49 373 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 FOXE1O00358 373 aaPredicted RBP13.6□□□□□ -0.23
CPSF7-201ENST00000340437 EIF2S1P05198 315 aaKnown RBP13.6□□□□□ -0.23
CPSF7-201ENST00000340437 C6P13671 934 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 LIMS1P48059 325 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 ZNF730Q6ZMV8 503 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 Q8N402 240 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 C12orf76Q8N812 135 aaPredicted RBP13.6□□□□□ -0.23
CPSF7-201ENST00000340437 TEX47Q8TBZ9 253 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 TM9SF4Q92544 642 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 RAD51AP1Q96B01 352 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 ZNF354BQ96LW1 612 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 ZNF582Q96NG8 517 aaPredicted RBP13.6□□□□□ -0.23
CPSF7-201ENST00000340437 TTTY10Q9BZA0 68 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 C3orf14Q9HBI5 128 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 FRMPD3Q5JV73 1810 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 A0A075B6Q4 140 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 MMP12P39900 470 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 KIR2DL3P43628 341 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 RFX3P48380 749 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 ZNF33BQ06732 778 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 IL20RBQ6UXL0 311 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 ZNF547Q8IVP9 402 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 OR5P2Q8WZ92 322 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 SLC9A8Q9Y2E8 581 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 BRWD1Q9NSI6 2320 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 HIDE1A8MVS5 230 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 GPR4P46093 362 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 CLCNKAP51800 687 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 C9orf64Q5T6V5 341 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 CNIH2Q6PI25 160 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 UNC5DQ6UXZ4 953 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 PROKR2Q8NFJ6 384 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 PHF21AQ96BD5 680 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 AIF1LQ9BQI0 150 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 TEKT2Q9UIF3 430 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 KCNE3Q9Y6H6 103 aa13.6□□□□□ -0.23
CPSF7-201ENST00000340437 SCN3AQ9NY46 2000 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 FAM172BPA6NC97 362 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 HRO43593 1189 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 PCDH8O95206 1070 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 MSL3P1P0C860 447 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 PCSK2P16519 638 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 KCNJ5P48544 419 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 PDE7AQ13946 482 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 SLC35F1Q5T1Q4 408 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 ZFPM2Q8WW38 1151 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 UBE2E3Q969T4 207 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 ZBED6CLQ96FA7 236 aaPredicted RBP13.59□□□□□ -0.23
CPSF7-201ENST00000340437 LMLNQ96KR4 655 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 DCLRE1CQ96SD1 692 aaKnown RBP13.59□□□□□ -0.23
CPSF7-201ENST00000340437 ZDHHC5Q9C0B5 715 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 ZCCHC2Q9C0B9 1178 aaKnown RBP13.59□□□□□ -0.23
CPSF7-201ENST00000340437 IRF2BPLQ9H1B7 796 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 SERHL2Q9H4I8 314 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 PRKAG2Q9UGJ0 569 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 GSTK1Q9Y2Q3 226 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 PCDHGB2Q9Y5G2 931 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 IRAK3Q9Y616 596 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 CSNK1G3Q9Y6M4 447 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 PRAMEF27A3QJZ7 478 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 FAM170BA6NMN3 283 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 ISM1B1AKI9 464 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 DVL2O14641 736 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 LCMT2O60294 686 aaKnown RBP13.59□□□□□ -0.23
CPSF7-201ENST00000340437 PDE9AO76083 593 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 IL12RB1P42701 662 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 CTBP2P56545 445 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 C21orf58P58505 322 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 FABP5Q01469 135 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 CSTF1Q05048 431 aaKnown RBP13.59□□□□□ -0.23
CPSF7-201ENST00000340437 TMEM107Q6UX40 140 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 NOXA1Q86UR1 476 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 ZNF557Q8N988 423 aaPredicted RBP13.59□□□□□ -0.23
CPSF7-201ENST00000340437 OR8K5Q8NH50 307 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 CREB3L4Q8TEY5 395 aa13.59□□□□□ -0.23
CPSF7-201ENST00000340437 NEURL3Q96EH8 262 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms