RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 GRHL3Q8TE85 626 aa14.1□□□□□ -0.15
UBE3B-201ENST00000340074 ADIPOR1Q96A54 375 aa14.1□□□□□ -0.15
UBE3B-201ENST00000340074 TMEM125Q96AQ2 219 aa14.1□□□□□ -0.15
UBE3B-201ENST00000340074 ZNF764Q96H86 408 aaPredicted RBP14.1□□□□□ -0.15
UBE3B-201ENST00000340074 AMDHD1Q96NU7 426 aa14.1□□□□□ -0.15
UBE3B-201ENST00000340074 INTS9Q9NV88 658 aaKnown RBP14.1□□□□□ -0.15
UBE3B-201ENST00000340074 HPF1Q9NWY4 346 aa14.1□□□□□ -0.15
UBE3B-201ENST00000340074 SLCO1B7G3V0H7 640 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 SDHDO14521 159 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 PDPK1O15530 556 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 NME2P1O60361 137 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 VPS4BO75351 444 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 RASAL1O95294 804 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 GPX3P22352 226 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 NME2P22392 152 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 HPCAL1P37235 193 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 DIO3P55073 304 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 PMP22Q01453 160 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 INAQ16352 499 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 HLA-DQA1Q5Y7H0 255 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 OPN5Q6U736 354 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 FAM180AQ6UWF9 173 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 TMEM107Q6UX40 140 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 LARP4Q71RC2 724 aaKnown RBP eCLIP14.09□□□□□ -0.15
UBE3B-201ENST00000340074 R3HCC1LQ7Z5L2 792 aaKnown RBP14.09□□□□□ -0.15
UBE3B-201ENST00000340074 GPALPP1Q8IXQ4 340 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 KRTCAP2Q8N6L1 136 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 ZNF441Q8N8Z8 693 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 OR7G2Q8NG99 324 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 OR7A2PQ8NGA2 310 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 PIWIL2Q8TC59 973 aaKnown RBP14.09□□□□□ -0.15
UBE3B-201ENST00000340074 NUDT8Q8WV74 236 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 ERP27Q96DN0 273 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 MTERF3Q96E29 417 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 BARD1Q99728 777 aaKnown RBP14.09□□□□□ -0.15
UBE3B-201ENST00000340074 ASIC5Q9NY37 505 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 ATP6V1HQ9UI12 483 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 CFL2Q9Y281 166 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 RP1L1Q8IWN7 2480 aaPredicted RBP14.09□□□□□ -0.15
UBE3B-201ENST00000340074 HELZ2Q9BYK8 2649 aaKnown RBP14.09□□□□□ -0.15
UBE3B-201ENST00000340074 TENM4Q6N022 2769 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 ESPL1Q14674 2120 aa14.09□□□□□ -0.15
UBE3B-201ENST00000340074 TRPC5OSA6NMA1 111 aa14.08□□□□□ -0.15
UBE3B-201ENST00000340074 PLOD3O60568 738 aa14.08□□□□□ -0.15
UBE3B-201ENST00000340074 NME6O75414 186 aaPredicted RBP14.08□□□□□ -0.15
UBE3B-201ENST00000340074 BCAS2O75934 225 aaPredicted RBP14.08□□□□□ -0.15
UBE3B-201ENST00000340074 LBPP18428 481 aa14.08□□□□□ -0.15
UBE3B-201ENST00000340074 MC3RP41968 323 aa14.08□□□□□ -0.15
UBE3B-201ENST00000340074 EMDP50402 254 aa14.08□□□□□ -0.15
UBE3B-201ENST00000340074 SRSF11Q05519 484 aaKnown RBP14.08□□□□□ -0.15
UBE3B-201ENST00000340074 HSPB3Q12988 150 aa14.08□□□□□ -0.15
UBE3B-201ENST00000340074 FHL5Q5TD97 284 aa14.08□□□□□ -0.15
UBE3B-201ENST00000340074 LYPD8Q6UX82 237 aa14.08□□□□□ -0.15
UBE3B-201ENST00000340074 ZNF551Q7Z340 670 aaPredicted RBP14.08□□□□□ -0.15
UBE3B-201ENST00000340074 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.08□□□□□ -0.15
UBE3B-201ENST00000340074 RIMKLAQ8IXN7 391 aa14.08□□□□□ -0.15
UBE3B-201ENST00000340074 SLC15A4Q8N697 577 aa14.08□□□□□ -0.15
UBE3B-201ENST00000340074 TP53INP1Q96A56 240 aa14.08□□□□□ -0.15
UBE3B-201ENST00000340074 ITPAQ9BY32 194 aa14.08□□□□□ -0.15
UBE3B-201ENST00000340074 WDR55Q9H6Y2 383 aaPredicted RBP14.08□□□□□ -0.15
UBE3B-201ENST00000340074 SLCO1B3Q9NPD5 702 aa14.08□□□□□ -0.15
UBE3B-201ENST00000340074 AGPAT4Q9NRZ5 378 aa14.08□□□□□ -0.15
UBE3B-201ENST00000340074 PRODH2Q9UF12 536 aa14.08□□□□□ -0.15
UBE3B-201ENST00000340074 NCKAP5O14513 1909 aa14.08□□□□□ -0.16
UBE3B-201ENST00000340074 FREM3P0C091 2139 aa14.08□□□□□ -0.16
UBE3B-201ENST00000340074 A0A087WV62 115 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 GOLGA8QA0A0J9YX86 632 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 GOLGA8OA6NCC3 632 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 GOLGA8NF8WBI6 632 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 SLITRK5O94991 958 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 LAMP1P11279 417 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 EFNA1P20827 205 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-201ENST00000340074 PRPS1L1P21108 318 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 EPHA3P29320 983 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 RPL3P39023 403 aaKnown RBP14.07□□□□□ -0.16
UBE3B-201ENST00000340074 FRKP42685 505 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-201ENST00000340074 CLDN8P56748 225 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 NNATQ16517 81 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 ZNF791Q3KP31 576 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-201ENST00000340074 TMEM64Q6YI46 380 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 MAVSQ7Z434 540 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 LRRC34Q8IZ02 419 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 TAGAPQ8N103 731 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 BCORP1Q8N888 145 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 PSD4Q8NDX1 1056 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 C17orf47Q8NEP4 570 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 FAR1Q8WVX9 515 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 SPACA9Q96E40 222 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-201ENST00000340074 ELP4Q96EB1 424 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 ZBED6CLQ96FA7 236 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-201ENST00000340074 MAGED4Q96JG8 741 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 C7orf26Q96N11 449 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 NXF5Q9H1B4 397 aaKnown RBP14.07□□□□□ -0.16
UBE3B-201ENST00000340074 TIMMDC1Q9NPL8 285 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 KLF13Q9Y2Y9 288 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-201ENST00000340074 UBR5O95071 2799 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-201ENST00000340074 TCP11X1B4DZS4 312 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 PLOD2O00469 737 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 ZNF195O14628 629 aa14.07□□□□□ -0.16
UBE3B-201ENST00000340074 ALDOCP09972 364 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms