RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 CAMK1GQ96NX5 476 aa15.39■□□□□ 0.05
LITAF-201ENST00000339430 MGLLQ99685 303 aa15.39■□□□□ 0.05
LITAF-201ENST00000339430 TEX101Q9BY14 249 aa15.39■□□□□ 0.05
LITAF-201ENST00000339430 DDX31Q9H8H2 851 aaKnown RBP15.39■□□□□ 0.05
LITAF-201ENST00000339430 P2RX2Q9UBL9 471 aa15.39■□□□□ 0.05
LITAF-201ENST00000339430 A0A0A6YYD5 115 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 LRIT2A6NDA9 550 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 CHURC1-FNTBB4DL54 471 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 TBX1O43435 398 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 SERPINB7O75635 380 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 C8orf89P0DMQ9 161 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 SEPHS1P49903 392 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 XKP51811 444 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 UGT2B15P54855 530 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 PRDX1Q06830 199 aaKnown RBP15.38■□□□□ 0.05
LITAF-201ENST00000339430 SLC13A2Q13183 592 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 COL9A2Q14055 689 aaPredicted RBP15.38■□□□□ 0.05
LITAF-201ENST00000339430 PLAG1Q6DJT9 500 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 PGBD2Q6P3X8 592 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 ZNF367Q7RTV3 350 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 IQCF1Q8N6M8 205 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 NATD1Q8N6N6 113 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 AMER2Q8N7J2 671 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 OR8K5Q8NH50 307 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 SLC7A13Q8TCU3 470 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 POLR2J3Q9H1A7 115 aaKnown RBP15.38■□□□□ 0.05
LITAF-201ENST00000339430 FZD3Q9NPG1 666 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 KLHL20Q9Y2M5 609 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 WBP11Q9Y2W2 641 aaKnown RBP15.38■□□□□ 0.05
LITAF-201ENST00000339430 SCN3AQ9NY46 2000 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 A0A1W2PS29 197 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 SH3D21A4FU49 640 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 AGAP5A6NIR3 686 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 STK25O00506 426 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 SLC31A1O15431 190 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 MPZL2O60487 215 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 TNNI3P19429 210 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 BCL6P41182 706 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 TPRG1LQ5T0D9 272 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 MEX3DQ86XN8 651 aaKnown RBP15.38■□□□□ 0.05
LITAF-201ENST00000339430 CADM3Q8N126 398 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 RAB42Q8N4Z0 105 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 KBTBD8Q8NFY9 601 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 BBS4Q96RK4 519 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 BTBD1Q9H0C5 482 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 CLEC2DQ9UHP7 191 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 ZNF229Q9UJW7 825 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 ACSL5Q9ULC5 683 aa15.38■□□□□ 0.05
LITAF-201ENST00000339430 ARHGAP33O14559 1287 aa15.37■□□□□ 0.05
LITAF-201ENST00000339430 PGRMC2O15173 223 aa15.37■□□□□ 0.05
LITAF-201ENST00000339430 ERI3O43414 337 aaKnown RBP15.37■□□□□ 0.05
LITAF-201ENST00000339430 KIAA0513O60268 411 aa15.37■□□□□ 0.05
LITAF-201ENST00000339430 UGT2B17O75795 530 aa15.37■□□□□ 0.05
LITAF-201ENST00000339430 GTF2E2P29084 291 aaKnown RBP15.37■□□□□ 0.05
LITAF-201ENST00000339430 RAB28P51157 221 aa15.37■□□□□ 0.05
LITAF-201ENST00000339430 OLR1P78380 273 aa15.37■□□□□ 0.05
LITAF-201ENST00000339430 SLAMF1Q13291 335 aa15.37■□□□□ 0.05
LITAF-201ENST00000339430 CYP4Z2PQ8N1L4 340 aa15.37■□□□□ 0.05
LITAF-201ENST00000339430 TCEANCQ8N8B7 351 aa15.37■□□□□ 0.05
LITAF-201ENST00000339430 FAM83FQ8NEG4 500 aaPredicted RBP15.37■□□□□ 0.05
LITAF-201ENST00000339430 C9orf43Q8TAL5 461 aaPredicted RBP15.37■□□□□ 0.05
LITAF-201ENST00000339430 CDCA4Q9BXL8 241 aa15.37■□□□□ 0.05
LITAF-201ENST00000339430 MIR1-1HGQ9H1L0 117 aa15.37■□□□□ 0.05
LITAF-201ENST00000339430 NT5DC2Q9H857 520 aa15.37■□□□□ 0.05
LITAF-201ENST00000339430 SLC35C2Q9NQQ7 365 aa15.37■□□□□ 0.05
LITAF-201ENST00000339430 ACSS1Q9NUB1 689 aaPredicted RBP15.37■□□□□ 0.05
LITAF-201ENST00000339430 QPCTLQ9NXS2 382 aa15.37■□□□□ 0.05
LITAF-201ENST00000339430 CNOT2Q9NZN8 540 aaKnown RBP15.37■□□□□ 0.05
LITAF-201ENST00000339430 FBXW2Q9UKT8 454 aa15.37■□□□□ 0.05
LITAF-201ENST00000339430 A4GNTQ9UNA3 340 aa15.37■□□□□ 0.05
LITAF-201ENST00000339430 MGAT4BQ9UQ53 548 aa15.37■□□□□ 0.05
LITAF-201ENST00000339430 PDZK1P1A8MUH7 402 aa15.36■□□□□ 0.05
LITAF-201ENST00000339430 FAAHO00519 579 aa15.36■□□□□ 0.05
LITAF-201ENST00000339430 CLEC3AO75596 197 aa15.36■□□□□ 0.05
LITAF-201ENST00000339430 DDX5P17844 614 aaKnown RBP15.36■□□□□ 0.05
LITAF-201ENST00000339430 MAGP20916 626 aa15.36■□□□□ 0.05
LITAF-201ENST00000339430 SERPINB1P30740 379 aa15.36■□□□□ 0.05
LITAF-201ENST00000339430 DUSP2Q05923 314 aa15.36■□□□□ 0.05
LITAF-201ENST00000339430 CBX3Q13185 183 aa15.36■□□□□ 0.05
LITAF-201ENST00000339430 ILKQ13418 452 aa15.36■□□□□ 0.05
LITAF-201ENST00000339430 LASP1Q14847 261 aaKnown RBP15.36■□□□□ 0.05
LITAF-201ENST00000339430 CASP12Q6UXS9 341 aa15.36■□□□□ 0.05
LITAF-201ENST00000339430 CCDC116Q8IYX3 515 aa15.36■□□□□ 0.05
LITAF-201ENST00000339430 TSTD1Q8NFU3 115 aa15.36■□□□□ 0.05
LITAF-201ENST00000339430 NELL2Q99435 816 aa15.36■□□□□ 0.05
LITAF-201ENST00000339430 QRSL1Q9H0R6 528 aaKnown RBP15.36■□□□□ 0.05
LITAF-201ENST00000339430 ANKRA2Q9H9E1 313 aa15.36■□□□□ 0.05
LITAF-201ENST00000339430 TBC1D17Q9HA65 648 aa15.36■□□□□ 0.05
LITAF-201ENST00000339430 SLC25A19Q9HC21 320 aa15.36■□□□□ 0.05
LITAF-201ENST00000339430 ANKHQ9HCJ1 492 aa15.36■□□□□ 0.05
LITAF-201ENST00000339430 GPSM3Q9Y4H4 160 aa15.36■□□□□ 0.05
LITAF-201ENST00000339430 GPC6Q9Y625 555 aaPredicted RBP15.36■□□□□ 0.05
LITAF-201ENST00000339430 DNMT3AQ9Y6K1 912 aaPredicted RBP15.36■□□□□ 0.05
LITAF-201ENST00000339430 HAT1O14929 419 aa15.36■□□□□ 0.05
LITAF-201ENST00000339430 NME6O75414 186 aaPredicted RBP15.36■□□□□ 0.05
LITAF-201ENST00000339430 UPK1BO75841 260 aa15.36■□□□□ 0.05
LITAF-201ENST00000339430 TRIM23P36406 574 aa15.36■□□□□ 0.05
LITAF-201ENST00000339430 SOX3P41225 446 aa15.36■□□□□ 0.05
LITAF-201ENST00000339430 SLC15A1P46059 708 aa15.36■□□□□ 0.05
LITAF-201ENST00000339430 SSX1Q16384 188 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms