RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 NPTNQ9Y639 398 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 GLTPD2A6NH11 291 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 FAAHO00519 579 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 SYPP08247 313 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 IDSP22304 550 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 AOAHP28039 575 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 GNA13Q14344 377 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 ST8SIA2Q92186 375 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 SMG7Q92540 1137 aaKnown RBP23.04■■□□□ 1.28
SOX1-201ENST00000330949 ASB8Q9H765 288 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 BRD7Q9NPI1 651 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 MRPS18AQ9NVS2 196 aaKnown RBP23.04■■□□□ 1.28
SOX1-201ENST00000330949 TMEM161AQ9NX61 479 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 NINQ8N4C6 2090 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 PDE4DIPQ5VU43 2346 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 EEF1E1O43324 174 aaKnown RBP23.03■■□□□ 1.28
SOX1-201ENST00000330949 TFPIP10646 304 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 ACP2P11117 423 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 PITPNBP48739 271 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 PCBP3P57721 371 aaKnown RBP23.03■■□□□ 1.28
SOX1-201ENST00000330949 TUSC3Q13454 348 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 ASPGQ86U10 573 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 ZFP41Q8N8Y5 198 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 TEFMQ96QE5 360 aaKnown RBP23.03■■□□□ 1.28
SOX1-201ENST00000330949 OSGEPL1Q9H4B0 414 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 FBXO44Q9H4M3 255 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 CLCA2Q9UQC9 943 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 GABRPO00591 440 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 INPPL1O15357 1258 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 CBSLP0DN79 551 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 ITPKAP23677 461 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 CBSP35520 551 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 RFX3P48380 749 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 ERVFC1P60507 584 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 CHIT1Q13231 466 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 SEC23BQ15437 767 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 GSG1Q2KHT4 349 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 WASH2PQ6VEQ5 465 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 MACC1Q6ZN28 852 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 PRICKLE2Q7Z3G6 844 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 CELF5Q8N6W0 485 aaKnown RBP23.03■■□□□ 1.28
SOX1-201ENST00000330949 KCT2Q8NC54 265 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 CLRN3Q8NCR9 226 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 HSD17B8Q92506 261 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 TMED9Q9BVK6 235 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 TBC1D17Q9HA65 648 aa23.03■■□□□ 1.28
SOX1-201ENST00000330949 SHISA3A0PJX4 238 aa23.02■■□□□ 1.28
SOX1-201ENST00000330949 MGAT4DA6NG13 374 aa23.02■■□□□ 1.28
SOX1-201ENST00000330949 ITGALP20701 1170 aa23.02■■□□□ 1.28
SOX1-201ENST00000330949 ELAVL4P26378 380 aaKnown RBP23.02■■□□□ 1.28
SOX1-201ENST00000330949 DGKGP49619 791 aa23.02■■□□□ 1.28
SOX1-201ENST00000330949 LIM2P55344 173 aa23.02■■□□□ 1.28
SOX1-201ENST00000330949 IQCF1Q8N6M8 205 aa23.02■■□□□ 1.28
SOX1-201ENST00000330949 GOT1L1Q8NHS2 421 aaPredicted RBP23.02■■□□□ 1.28
SOX1-201ENST00000330949 WDR48Q8TAF3 677 aa23.02■■□□□ 1.28
SOX1-201ENST00000330949 SFXN2Q96NB2 322 aa23.02■■□□□ 1.28
SOX1-201ENST00000330949 MARCH2Q9P0N8 246 aa23.02■■□□□ 1.28
SOX1-201ENST00000330949 SPATA2Q9UM82 520 aa23.02■■□□□ 1.28
SOX1-201ENST00000330949 TOXO94900 526 aa23.02■■□□□ 1.28
SOX1-201ENST00000330949 TGM6O95932 706 aa23.02■■□□□ 1.28
SOX1-201ENST00000330949 RECKO95980 971 aa23.02■■□□□ 1.28
SOX1-201ENST00000330949 HIST1H2AGP0C0S8 130 aaPredicted RBP23.02■■□□□ 1.28
SOX1-201ENST00000330949 HIST1H2ADP20671 130 aa23.02■■□□□ 1.28
SOX1-201ENST00000330949 SLC6A12P48065 614 aa23.02■■□□□ 1.28
SOX1-201ENST00000330949 HNMTP50135 292 aa23.02■■□□□ 1.28
SOX1-201ENST00000330949 HBA1P69905 142 aa23.02■■□□□ 1.28
SOX1-201ENST00000330949 SCRN3Q0VDG4 424 aa23.02■■□□□ 1.28
SOX1-201ENST00000330949 GPR68Q15743 365 aa23.02■■□□□ 1.28
SOX1-201ENST00000330949 ST3GAL2Q16842 350 aa23.02■■□□□ 1.28
SOX1-201ENST00000330949 ZXDCQ2QGD7 858 aaPredicted RBP23.02■■□□□ 1.28
SOX1-201ENST00000330949 HIST1H2AHQ96KK5 128 aa23.02■■□□□ 1.28
SOX1-201ENST00000330949 HIST1H2AJQ99878 128 aa23.02■■□□□ 1.28
SOX1-201ENST00000330949 SAV1Q9H4B6 383 aaPredicted RBP23.02■■□□□ 1.28
SOX1-201ENST00000330949 DNAJC11Q9NVH1 559 aa23.02■■□□□ 1.28
SOX1-201ENST00000330949 HPF1Q9NWY4 346 aa23.02■■□□□ 1.28
SOX1-201ENST00000330949 CBLCQ9ULV8 474 aa23.02■■□□□ 1.28
SOX1-201ENST00000330949 PRAMEF4O60810 478 aa23.01■■□□□ 1.27
SOX1-201ENST00000330949 F11P03951 625 aa23.01■■□□□ 1.27
SOX1-201ENST00000330949 FCER2P06734 321 aa23.01■■□□□ 1.27
SOX1-201ENST00000330949 ANXA4P09525 319 aaPredicted RBP23.01■■□□□ 1.27
SOX1-201ENST00000330949 TACR2P21452 398 aa23.01■■□□□ 1.27
SOX1-201ENST00000330949 ACSL1P33121 698 aa23.01■■□□□ 1.27
SOX1-201ENST00000330949 GAS1P54826 345 aa23.01■■□□□ 1.27
SOX1-201ENST00000330949 AP1S2P56377 157 aa23.01■■□□□ 1.27
SOX1-201ENST00000330949 TSPAN5P62079 268 aa23.01■■□□□ 1.27
SOX1-201ENST00000330949 TAP2Q03519 686 aa23.01■■□□□ 1.27
SOX1-201ENST00000330949 NFATC2Q13469 925 aa23.01■■□□□ 1.27
SOX1-201ENST00000330949 PRAMEF9Q5VWM5 478 aa23.01■■□□□ 1.27
SOX1-201ENST00000330949 FAM198BQ6UWH4 519 aa23.01■■□□□ 1.27
SOX1-201ENST00000330949 GULP1Q9UBP9 304 aa23.01■■□□□ 1.27
SOX1-201ENST00000330949 SLC22A14Q9Y267 594 aa23.01■■□□□ 1.27
SOX1-201ENST00000330949 F5H5T6 163 aa23.01■■□□□ 1.27
SOX1-201ENST00000330949 KDELR3O43731 214 aa23.01■■□□□ 1.27
SOX1-201ENST00000330949 UGT2B7P16662 529 aa23.01■■□□□ 1.27
SOX1-201ENST00000330949 HOXC8P31273 242 aa23.01■■□□□ 1.27
SOX1-201ENST00000330949 SF1Q15637 639 aaKnown RBP23.01■■□□□ 1.27
SOX1-201ENST00000330949 IDNKQ5T6J7 187 aa23.01■■□□□ 1.27
SOX1-201ENST00000330949 UBE2R2Q712K3 238 aaPredicted RBP23.01■■□□□ 1.27
SOX1-201ENST00000330949 EID2BQ96D98 161 aa23.01■■□□□ 1.27
SOX1-201ENST00000330949 RNFT2Q96EX2 444 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms