RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 ANXA11P50995 505 aaKnown RBP13.72□□□□□ -0.21
TPM3-206ENST00000330188 SHHQ15465 462 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 MED22Q15528 200 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 SRFBP1Q8NEF9 429 aaKnown RBP13.72□□□□□ -0.21
TPM3-206ENST00000330188 KBTBD8Q8NFY9 601 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 WDR36Q8NI36 951 aaKnown RBP13.72□□□□□ -0.21
TPM3-206ENST00000330188 MOAP1Q96BY2 351 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 MGLLQ99685 303 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 CENPOQ9BU64 300 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 FNDC11Q9BVV2 318 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 NXF2Q9GZY0 626 aaKnown RBP13.72□□□□□ -0.21
TPM3-206ENST00000330188 TBC1D29Q9UFV1 150 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 DOLKQ9UPQ8 538 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 KCNE3Q9Y6H6 103 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 COLEC10Q9Y6Z7 277 aa13.72□□□□□ -0.21
TPM3-206ENST00000330188 A0A0G2JPF8 293 aa13.71□□□□□ -0.21
TPM3-206ENST00000330188 A0A1W2PQF6 199 aa13.71□□□□□ -0.21
TPM3-206ENST00000330188 POM121BA6NF01 834 aa13.71□□□□□ -0.21
TPM3-206ENST00000330188 HNRNPCL2B2RXH8 293 aa13.71□□□□□ -0.21
TPM3-206ENST00000330188 HNRNPCL3B7ZW38 293 aa13.71□□□□□ -0.21
TPM3-206ENST00000330188 BOLA2-SMG1P6H3BVE0 249 aa13.71□□□□□ -0.21
TPM3-206ENST00000330188 PROM1O43490 865 aa13.71□□□□□ -0.21
TPM3-206ENST00000330188 TPST2O60704 377 aa13.71□□□□□ -0.21
TPM3-206ENST00000330188 ADAM23O75077 832 aa13.71□□□□□ -0.21
TPM3-206ENST00000330188 CHRM5P08912 532 aaPredicted RBP13.71□□□□□ -0.21
TPM3-206ENST00000330188 HNRNPCL4P0DMR1 293 aa13.71□□□□□ -0.21
TPM3-206ENST00000330188 MMP11P24347 488 aa13.71□□□□□ -0.21
TPM3-206ENST00000330188 MAN2A2P49641 1150 aa13.71□□□□□ -0.21
TPM3-206ENST00000330188 ALDH6A1Q02252 535 aaKnown RBP13.71□□□□□ -0.21
TPM3-206ENST00000330188 CEBPEQ15744 281 aa13.71□□□□□ -0.21
TPM3-206ENST00000330188 TSTQ16762 297 aaKnown RBP13.71□□□□□ -0.21
TPM3-206ENST00000330188 CASP12Q6UXS9 341 aa13.71□□□□□ -0.21
TPM3-206ENST00000330188 TMEM184AQ6ZMB5 413 aa13.71□□□□□ -0.21
TPM3-206ENST00000330188 ZER1Q7Z7L7 766 aa13.71□□□□□ -0.21
TPM3-206ENST00000330188 PRRC1Q96M27 445 aa13.71□□□□□ -0.21
TPM3-206ENST00000330188 Q96MT0 163 aa13.71□□□□□ -0.21
TPM3-206ENST00000330188 SLC6A18Q96N87 628 aa13.71□□□□□ -0.21
TPM3-206ENST00000330188 CHCHD6Q9BRQ6 235 aa13.71□□□□□ -0.21
TPM3-206ENST00000330188 CCDC59Q9P031 241 aaKnown RBP13.71□□□□□ -0.21
TPM3-206ENST00000330188 SNX7Q9UNH6 387 aa13.71□□□□□ -0.21
TPM3-206ENST00000330188 A3GALT2U3KPV4 340 aa13.71□□□□□ -0.21
TPM3-206ENST00000330188 EMC8O43402 210 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 KDM1AO60341 852 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 ASGR2P07307 311 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 PPP5CP53041 499 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 CLDN2P57739 230 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 STXBP1P61764 594 aaKnown RBP13.7□□□□□ -0.22
TPM3-206ENST00000330188 GNA13Q14344 377 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 GPAT3Q53EU6 434 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 PRAMEF8Q5VWM4 474 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 PRAMEF7Q5VXH5 474 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 MEDAGQ5VYS4 303 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 CD300LDQ6UXZ3 194 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 VN1R4Q7Z5H5 301 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 ATCAYQ86WG3 371 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 AMIGO1Q86WK6 493 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 PAQR7Q86WK9 346 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 AMER2Q8N7J2 671 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 IL17RCQ8NAC3 791 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 MORN4Q8NDC4 146 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 OR4E2Q8NGC2 313 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 OR4K5Q8NGD3 323 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 KLHL6Q8WZ60 621 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 OR1E3Q8WZA6 343 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 ZNF681Q96N22 645 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 OR7D2Q96RA2 312 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 CDADC1Q9BWV3 514 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 TAPBPLQ9BX59 468 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 PINK1Q9BXM7 581 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 NKX2-4Q9H2Z4 354 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 OR6C2Q9NZP2 312 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 KLF15Q9UIH9 416 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 RFXAPO00287 272 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 ARHGAP33O14559 1287 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 CASC3O15234 703 aaKnown RBP13.7□□□□□ -0.22
TPM3-206ENST00000330188 TNNI3P19429 210 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 CDH3P22223 829 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 TGM1P22735 817 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 AK4P27144 223 aaPredicted RBP13.7□□□□□ -0.22
TPM3-206ENST00000330188 CD40LGP29965 261 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 BUD31P41223 144 aaPredicted RBP13.7□□□□□ -0.22
TPM3-206ENST00000330188 MC3RP41968 323 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 LSM11P83369 360 aaKnown RBP eCLIP13.7□□□□□ -0.22
TPM3-206ENST00000330188 PRR5P85299 388 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 RELAQ04206 551 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 HYAL1Q12794 435 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 COX10Q12887 443 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 TCEA2Q15560 299 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 SSX1Q16384 188 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 TJAP1Q5JTD0 557 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 MFSD4BQ5TF39 518 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 IQCHQ86VS3 1027 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 IQCF1Q8N6M8 205 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 TCEANCQ8N8B7 351 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 MINDY2Q8NBR6 621 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 NUP43Q8NFH3 380 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 OR8J1Q8NGP2 316 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 OR9A2Q8NGT5 310 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 LCN9Q8WX39 176 aa13.7□□□□□ -0.22
TPM3-206ENST00000330188 ELP4Q96EB1 424 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms