RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 FIS1Q9Y3D6 152 aa25.44■■□□□ 1.66
ATPAF1-201ENST00000329231 CCL27Q9Y4X3 112 aa25.44■■□□□ 1.66
ATPAF1-201ENST00000329231 POLR3HQ9Y535 204 aaPredicted RBP25.44■■□□□ 1.66
ATPAF1-201ENST00000329231 NPFFR2Q9Y5X5 522 aa25.44■■□□□ 1.66
ATPAF1-201ENST00000329231 CHCHD2Q9Y6H1 151 aaPredicted RBP25.44■■□□□ 1.66
ATPAF1-201ENST00000329231 MYO7BQ6PIF6 2116 aa25.43■■□□□ 1.66
ATPAF1-201ENST00000329231 A0A1B0GTH9 108 aa25.43■■□□□ 1.66
ATPAF1-201ENST00000329231 NPIPB8E9PQR5 432 aa25.43■■□□□ 1.66
ATPAF1-201ENST00000329231 SEC22BO75396 215 aa25.43■■□□□ 1.66
ATPAF1-201ENST00000329231 PRPH2P23942 346 aa25.43■■□□□ 1.66
ATPAF1-201ENST00000329231 PTGS2P35354 604 aa25.43■■□□□ 1.66
ATPAF1-201ENST00000329231 FOXO1Q12778 655 aa25.43■■□□□ 1.66
ATPAF1-201ENST00000329231 LTB4RQ15722 352 aa25.43■■□□□ 1.66
ATPAF1-201ENST00000329231 TRMT12Q53H54 448 aaKnown RBP25.43■■□□□ 1.66
ATPAF1-201ENST00000329231 NOXRED1Q6NXP6 359 aa25.43■■□□□ 1.66
ATPAF1-201ENST00000329231 ARHGAP11AQ6P4F7 1023 aa25.43■■□□□ 1.66
ATPAF1-201ENST00000329231 OR52R1Q8NGF1 315 aa25.43■■□□□ 1.66
ATPAF1-201ENST00000329231 OR5M3Q8NGP4 307 aa25.43■■□□□ 1.66
ATPAF1-201ENST00000329231 ERP27Q96DN0 273 aa25.43■■□□□ 1.66
ATPAF1-201ENST00000329231 CENPHQ9H3R5 247 aa25.43■■□□□ 1.66
ATPAF1-201ENST00000329231 MYNNQ9NPC7 610 aa25.43■■□□□ 1.66
ATPAF1-201ENST00000329231 C1orf109Q9NX04 203 aa25.43■■□□□ 1.66
ATPAF1-201ENST00000329231 TUBA8Q9NY65 449 aaPredicted RBP25.43■■□□□ 1.66
ATPAF1-201ENST00000329231 SEC23IPQ9Y6Y8 1000 aaKnown RBP25.43■■□□□ 1.66
ATPAF1-201ENST00000329231 TYROBPO43914 113 aa25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 BCAS2O75934 225 aaPredicted RBP25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 CBX7O95931 251 aa25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 FGF4P08620 206 aa25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 NEFHP12036 1026 aa25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 PCSK2P16519 638 aa25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 MPIP34949 423 aa25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 KCNJ2P63252 427 aa25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 RPS6KA2Q15349 733 aa25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 CEBPEQ15744 281 aa25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 HYAL4Q2M3T9 481 aa25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 ZNF628Q5EBL2 1059 aa25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 ARL13AQ5H913 290 aaPredicted RBP25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 PRAMEF20Q5VT98 475 aa25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 KANK2Q63ZY3 851 aa25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 FAM71E1Q6IPT2 247 aa25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 RPTNQ6XPR3 784 aa25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 TMEM64Q6YI46 380 aa25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 FGD2Q7Z6J4 655 aa25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 EID3Q8N140 333 aa25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 FAM109AQ8N4B1 249 aa25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 PUM2Q8TB72 1066 aaKnown RBP eCLIP25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 PGM2Q96G03 612 aa25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 BBS4Q96RK4 519 aa25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 LRTM1Q9HBL6 345 aa25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 MIEF1Q9NQG6 463 aa25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 BOKQ9UMX3 212 aaPredicted RBP25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 DTX4Q9Y2E6 619 aa25.42■■□□□ 1.66
ATPAF1-201ENST00000329231 ZNHIT1O43257 154 aa25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 PDE9AO76083 593 aa25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 CHRNGP07510 517 aa25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 SOX18P35713 384 aa25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 SERPINB5P36952 375 aa25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 DCAF7P61962 342 aa25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 RPP38P78345 283 aaKnown RBP25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 MRPS35P82673 323 aaKnown RBP25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 DUSP8Q13202 625 aa25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 KIAA0040Q15053 153 aa25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 TNFAIP8L3Q5GJ75 292 aa25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 TBCELQ5QJ74 424 aa25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 IKBIPQ70UQ0 350 aa25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 EXOC3L1Q86VI1 746 aa25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 TICAM1Q8IUC6 712 aa25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 CLYBLQ8N0X4 340 aa25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 TMEM251Q8N6I4 163 aa25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 OR9A2Q8NGT5 310 aa25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 SECISBP2Q96T21 854 aaKnown RBP25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 ITPAQ9BY32 194 aa25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 NXF5Q9H1B4 397 aaKnown RBP25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 SSU72Q9NP77 194 aaKnown RBP25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 CNOT11Q9UKZ1 510 aaKnown RBP25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 MEMO1Q9Y316 297 aa25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 TRAF6Q9Y4K3 522 aa25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 DNAJC15Q9Y5T4 150 aa25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 PTGDR2Q9Y5Y4 395 aa25.41■■□□□ 1.66
ATPAF1-201ENST00000329231 CTIFO43310 598 aaKnown RBP25.4■■□□□ 1.66
ATPAF1-201ENST00000329231 ABCD3P28288 659 aa25.4■■□□□ 1.66
ATPAF1-201ENST00000329231 FBXW4P57775 412 aa25.4■■□□□ 1.66
ATPAF1-201ENST00000329231 HIST2H2BCQ6DN03 193 aa25.4■■□□□ 1.66
ATPAF1-201ENST00000329231 DOLPP1Q86YN1 238 aa25.4■■□□□ 1.66
ATPAF1-201ENST00000329231 FAM9CQ8IZT9 166 aa25.4■■□□□ 1.66
ATPAF1-201ENST00000329231 FAM57AQ8TBR7 257 aa25.4■■□□□ 1.66
ATPAF1-201ENST00000329231 ITLN2Q8WWU7 325 aaPredicted RBP25.4■■□□□ 1.66
ATPAF1-201ENST00000329231 DIO2Q92813 273 aa25.4■■□□□ 1.66
ATPAF1-201ENST00000329231 HSPBAP1Q96EW2 488 aa25.4■■□□□ 1.66
ATPAF1-201ENST00000329231 LCORQ96JN0 433 aaPredicted RBP25.4■■□□□ 1.66
ATPAF1-201ENST00000329231 DOHHQ9BU89 302 aa25.4■■□□□ 1.66
ATPAF1-201ENST00000329231 ZFP64Q9NPA5 681 aa25.4■■□□□ 1.66
ATPAF1-201ENST00000329231 TAS2R7Q9NYW3 318 aa25.4■■□□□ 1.66
ATPAF1-201ENST00000329231 CROCCQ5TZA2 2017 aa25.39■■□□□ 1.66
ATPAF1-201ENST00000329231 ANKRD33BA6NCL7 494 aa25.39■■□□□ 1.66
ATPAF1-201ENST00000329231 CYSRT1A8MQ03 144 aa25.39■■□□□ 1.66
ATPAF1-201ENST00000329231 ACOX3O15254 700 aa25.39■■□□□ 1.66
ATPAF1-201ENST00000329231 TPOP07202 933 aa25.39■■□□□ 1.66
ATPAF1-201ENST00000329231 BPGMP07738 259 aa25.39■■□□□ 1.66
ATPAF1-201ENST00000329231 LINC00032P0C843 101 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms