RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 OGFRL1Q5TC84 451 aaPredicted RBP10.84□□□□□ -0.67
COL4A5-201ENST00000328300 ZNF534Q76KX8 674 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 TMEM151BQ8IW70 566 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 ZNF595Q8IYB9 648 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 TMEM130Q8N3G9 435 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 L3MBTL4Q8NA19 623 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 GRPEL2Q8TAA5 225 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 ANHXE9PGG2 379 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 BCAT2O15382 392 aaPredicted RBP10.84□□□□□ -0.67
COL4A5-201ENST00000328300 DENRO43583 198 aaKnown RBP10.84□□□□□ -0.67
COL4A5-201ENST00000328300 CHRM5P08912 532 aaPredicted RBP10.84□□□□□ -0.67
COL4A5-201ENST00000328300 HTR6P50406 440 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 NKX3-2P78367 333 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 THOC7Q6I9Y2 204 aaKnown RBP10.84□□□□□ -0.67
COL4A5-201ENST00000328300 MCATQ8IVS2 390 aaKnown RBP10.84□□□□□ -0.67
COL4A5-201ENST00000328300 OR8H1Q8NGG4 311 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 KHSRPQ92945 711 aaKnown RBP eCLIP10.84□□□□□ -0.67
COL4A5-201ENST00000328300 SLC22A4Q9H015 551 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 GORASP2Q9H8Y8 452 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 ALKBH4Q9NXW9 302 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 BLOC1S5-TXNDC5H3BN57 136 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 H3BQ06 376 aaPredicted RBP10.84□□□□□ -0.67
COL4A5-201ENST00000328300 SOX1O00570 391 aaPredicted RBP10.84□□□□□ -0.67
COL4A5-201ENST00000328300 KHNYNO15037 678 aaKnown RBP10.84□□□□□ -0.67
COL4A5-201ENST00000328300 S1PR1P21453 382 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 ID2Q02363 134 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 GLT8D1Q68CQ7 371 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 GPAT4Q86UL3 456 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 TRIM73Q86UV7 250 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 NLRP8Q86W28 1048 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 TAMM41Q96BW9 452 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 PHF7Q9BWX1 381 aaPredicted RBP10.84□□□□□ -0.67
COL4A5-201ENST00000328300 SNTG1Q9NSN8 517 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 TEX13CA0A0J9YWL9 993 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 A0A1B0GTW7 788 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 HTR3EA5X5Y0 456 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 A6NIZ1 184 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 CTSCP53634 463 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 RAP1BP61224 184 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 RAP1AP62834 184 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 NSDHLQ15738 373 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 GARNL3Q5VVW2 1013 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 GTF2IRD2BQ6EKJ0 949 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 PTCRAQ6ISU1 281 aaPredicted RBP10.84□□□□□ -0.67
COL4A5-201ENST00000328300 GTF2IRD2Q86UP8 949 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 STX12Q86Y82 276 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 METTL4Q8N3J2 472 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 THAP4Q8WY91 577 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 NEIL2Q969S2 332 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 ASB16Q96NS5 453 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.84□□□□□ -0.67
COL4A5-201ENST00000328300 IRF2BPLQ9H1B7 796 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 DCSTAMPQ9H295 470 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 ABCB9Q9NP78 766 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 CENPMQ9NSP4 180 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 ASIC5Q9NY37 505 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 RNF6Q9Y252 685 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 GRXCR1A8MXD5 290 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 GPX3P22352 226 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 GGT5P36269 586 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 ACVR1Q04771 509 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 RUNDC3AQ59EK9 446 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 TMEM225Q6GV28 225 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 C5orf46Q6UWT4 87 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 ZNF480Q8WV37 535 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 TTYH2Q9BSA4 534 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 HDHD5Q9BXW7 423 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 MED28Q9H204 178 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 R3HDMLQ9H3Y0 253 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 LY75O60449 1722 aa10.84□□□□□ -0.67
COL4A5-201ENST00000328300 SDC1P18827 310 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 DPTQ07507 201 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 PLCZ1Q86YW0 608 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 SLC5A8Q8N695 610 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 C1orf216Q8TAB5 229 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 ARHGAP9Q9BRR9 750 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 CLMPQ9H6B4 373 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 OR2T1O43869 369 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 SLC6A9P48067 706 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 CHRDL2Q6WN34 429 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 PGBD5Q8N414 524 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 TAAR2Q9P1P5 351 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 TMEM181Q9P2C4 612 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 FAM25EA8MYX2 175 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 CENPBD1B2RD01 187 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 CCRL2O00421 344 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 PRKYO43930 277 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 CCR5P51681 352 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 RAB38P57729 211 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 SELENOWP63302 87 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 REEP5Q00765 189 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 ARL9Q6T311 187 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 TCEANCQ8N8B7 351 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 ACOT4Q8N9L9 421 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 OR2T4Q8NH00 348 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 ASB15Q8WXK1 588 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 HHIPQ96QV1 700 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 LMF2Q9BU23 707 aaKnown RBP10.83□□□□□ -0.68
COL4A5-201ENST00000328300 CST11Q9H112 138 aa10.83□□□□□ -0.68
COL4A5-201ENST00000328300 SEC61A2Q9H9S3 476 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms