RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 CADM3Q8N126 398 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 OR5T3Q8NGG3 340 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 OR4A15Q8NGL6 344 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 LILRB4Q8NHJ6 448 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 ADAMTS18Q8TE60 1221 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 LRTOMTQ8WZ04 291 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 CNRIP1Q96F85 164 aaPredicted RBP11.99□□□□□ -0.49
DDX39A-202ENST00000324340 CENPNQ96H22 339 aaPredicted RBP11.99□□□□□ -0.49
DDX39A-202ENST00000324340 SH3YL1Q96HL8 342 aaPredicted RBP11.99□□□□□ -0.49
DDX39A-202ENST00000324340 ZNF681Q96N22 645 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 CSF3RQ99062 836 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 CDC6Q99741 560 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 SLC29A1Q99808 456 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 TRIM8Q9BZR9 551 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 ALG2Q9H553 416 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 IKZF5Q9H5V7 419 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 KAT8Q9H7Z6 458 aaKnown RBP11.99□□□□□ -0.49
DDX39A-202ENST00000324340 NEUROD4Q9HD90 331 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 AKIP1Q9NQ31 210 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 FBXO8Q9NRD0 319 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 CUTCQ9NTM9 273 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 C5AR2Q9P296 337 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 NCDNQ9UBB6 729 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.99□□□□□ -0.49
DDX39A-202ENST00000324340 PACSIN3Q9UKS6 424 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 VPS4AQ9UN37 437 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 SNX13Q9Y5W8 968 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 UNC13CQ8NB66 2214 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 CROCCQ5TZA2 2017 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 SCN3AQ9NY46 2000 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 BLACEA4D250 179 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 GLOD5A6NK44 160 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 WASHC1A8K0Z3 465 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 CLOCKO15516 846 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 ZNF749O43361 778 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 CHST10O43529 356 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 CPSF4O95639 269 aaKnown RBP11.98□□□□□ -0.49
DDX39A-202ENST00000324340 EFNA1P20827 205 aaPredicted RBP11.98□□□□□ -0.49
DDX39A-202ENST00000324340 PPIBP23284 216 aaKnown RBP11.98□□□□□ -0.49
DDX39A-202ENST00000324340 LAMA1P25391 3075 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 AVPR1BP47901 424 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 GSK3BP49841 420 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 GZMMP51124 257 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 PDX1P52945 283 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 CDH15P55291 814 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 MTPNP58546 118 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 GABARAPL2P60520 117 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 LIPEQ05469 1076 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 GAB1Q13480 694 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 MTX3Q5HYI7 312 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 MFSD4BQ5TF39 518 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 HMBOX1Q6NT76 420 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 TUBA3EQ6PEY2 450 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 ZNF621Q6ZSS3 439 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 KCTD8Q6ZWB6 473 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 BPHLQ86WA6 291 aaPredicted RBP11.98□□□□□ -0.49
DDX39A-202ENST00000324340 DHFR2Q86XF0 187 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 SAMD14Q8IZD0 417 aaPredicted RBP11.98□□□□□ -0.49
DDX39A-202ENST00000324340 DTWD1Q8N5C7 304 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 DHRSXQ8N5I4 330 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 TMCO5AQ8N6Q1 288 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 RNF148Q8N7C7 305 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 RCBTB1Q8NDN9 531 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 SUN3Q8TAQ9 357 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 ZFP90Q8TF47 636 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 SLCO4A1Q96BD0 722 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 ZNF583Q96ND8 569 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 RDH12Q96NR8 316 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 AMDHD1Q96NU7 426 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 NDEL1Q9GZM8 345 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 ARMC7Q9H6L4 198 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 SYNDIG1Q9H7V2 258 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 UGT2A1Q9Y4X1 527 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 NOX1Q9Y5S8 564 aa11.98□□□□□ -0.49
DDX39A-202ENST00000324340 ANKRD34BA5PLL1 514 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 C4orf47A7E2U8 309 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 CLIC1O00299 241 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 DLGAP1O14490 977 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 DSCR3O14972 297 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 ACOX3O15254 700 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 ABCB7O75027 752 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 GMNNO75496 209 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 JRKO75564 520 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 KRT75O95678 551 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 GPIP06744 558 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 ABCB1P08183 1280 aaPredicted RBP11.97□□□□□ -0.49
DDX39A-202ENST00000324340 UMPSP11172 480 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 RNH1P13489 461 aaKnown RBP11.97□□□□□ -0.49
DDX39A-202ENST00000324340 CSNK2A2P19784 350 aaPredicted RBP11.97□□□□□ -0.49
DDX39A-202ENST00000324340 HTR1EP28566 365 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 NTSP30990 170 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 CCKBRP32239 447 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 SERPINB10P48595 397 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 MANFP55145 182 aaKnown RBP11.97□□□□□ -0.49
DDX39A-202ENST00000324340 SHC2P98077 582 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 TOP3AQ13472 1001 aaPredicted RBP11.97□□□□□ -0.49
DDX39A-202ENST00000324340 GTF2IRD2BQ6EKJ0 949 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 FAM180BQ6P0A1 224 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 PLEKHG7Q6ZR37 379 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 GTF2IRD2Q86UP8 949 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms