RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 ATG4BQ9Y4P1 393 aa11.91□□□□□ -0.5
PTPN6-201ENST00000318974 PCDHGA5Q9Y5G8 931 aa11.91□□□□□ -0.5
PTPN6-201ENST00000318974 SLC22A7Q9Y694 548 aa11.91□□□□□ -0.5
PTPN6-201ENST00000318974 TMEM131Q92545 1883 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 LY6G6EA0A0G2JKS1 128 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 A0A1W2PR48 441 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 CPED1A4D0V7 1026 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 FAM86C2PA6NEL3 165 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 ZNF99A8MXY4 864 aaPredicted RBP11.9□□□□□ -0.5
PTPN6-201ENST00000318974 GALR2O43603 387 aaPredicted RBP11.9□□□□□ -0.5
PTPN6-201ENST00000318974 B3GALT2O43825 422 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 PCDHGA12O60330 932 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 BCL10O95999 233 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 IFNA14P01570 189 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 ZNF182P17025 639 aaPredicted RBP11.9□□□□□ -0.5
PTPN6-201ENST00000318974 RRM2P31350 389 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 PRIM2P49643 509 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 SNRPNP63162 240 aaKnown RBP11.9□□□□□ -0.5
PTPN6-201ENST00000318974 CFHR1Q03591 330 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 EMX1Q04741 257 aaPredicted RBP11.9□□□□□ -0.5
PTPN6-201ENST00000318974 PIGFQ07326 219 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 NPRL3Q12980 569 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 MAD2L1BPQ15013 274 aaPredicted RBP11.9□□□□□ -0.5
PTPN6-201ENST00000318974 PROX2Q3B8N5 592 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 IFI44LQ53G44 452 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 GUSBP11Q6P575 273 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 ANKRD13BQ86YJ7 626 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 SLC30A8Q8IWU4 369 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 SPPL2AQ8TCT8 520 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 EXOSC8Q96B26 276 aaKnown RBP11.9□□□□□ -0.5
PTPN6-201ENST00000318974 MAPKAP1Q9BPZ7 522 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 DGCR6LQ9BY27 220 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 CCDC90BQ9GZT6 254 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 STARD5Q9NSY2 213 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 TAS2R7Q9NYW3 318 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 NDUFAF4Q9P032 175 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 C5AR2Q9P296 337 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 PHF11Q9UIL8 331 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 ENPP5Q9UJA9 477 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 RAB23Q9ULC3 237 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 MRPS2Q9Y399 296 aaKnown RBP11.9□□□□□ -0.5
PTPN6-201ENST00000318974 U3KQA8 63 aa11.9□□□□□ -0.5
PTPN6-201ENST00000318974 MN1Q10571 1320 aaPredicted RBP11.9□□□□□ -0.5
PTPN6-201ENST00000318974 PROM1O43490 865 aa11.9□□□□□ -0.51
PTPN6-201ENST00000318974 AIFM1O95831 613 aa11.9□□□□□ -0.51
PTPN6-201ENST00000318974 ITGA2P17301 1181 aa11.9□□□□□ -0.51
PTPN6-201ENST00000318974 CD247P20963 164 aa11.9□□□□□ -0.51
PTPN6-201ENST00000318974 FMO3P31513 532 aa11.9□□□□□ -0.51
PTPN6-201ENST00000318974 CSF2RBP32927 897 aa11.9□□□□□ -0.51
PTPN6-201ENST00000318974 CHI3L1P36222 383 aaPredicted RBP11.9□□□□□ -0.51
PTPN6-201ENST00000318974 GABRA4P48169 554 aa11.9□□□□□ -0.51
PTPN6-201ENST00000318974 CSNK2BP67870 215 aa11.9□□□□□ -0.51
PTPN6-201ENST00000318974 EEF1A2Q05639 463 aaKnown RBP11.9□□□□□ -0.51
PTPN6-201ENST00000318974 ZNF829Q3KNS6 432 aaPredicted RBP11.9□□□□□ -0.51
PTPN6-201ENST00000318974 WDR74Q6RFH5 385 aaPredicted RBP11.9□□□□□ -0.51
PTPN6-201ENST00000318974 GIPC3Q8TF64 312 aa11.9□□□□□ -0.51
PTPN6-201ENST00000318974 FAR1Q8WVX9 515 aa11.9□□□□□ -0.51
PTPN6-201ENST00000318974 OR5P2Q8WZ92 322 aa11.9□□□□□ -0.51
PTPN6-201ENST00000318974 UCN3Q969E3 161 aa11.9□□□□□ -0.51
PTPN6-201ENST00000318974 HRASLS5Q96KN8 279 aa11.9□□□□□ -0.51
PTPN6-201ENST00000318974 SMOC1Q9H4F8 434 aa11.9□□□□□ -0.51
PTPN6-201ENST00000318974 THSD1Q9NS62 852 aa11.9□□□□□ -0.51
PTPN6-201ENST00000318974 LYVE1Q9Y5Y7 322 aa11.9□□□□□ -0.51
PTPN6-201ENST00000318974 R4GN57 208 aa11.9□□□□□ -0.51
PTPN6-201ENST00000318974 TNFRSF11BO00300 401 aa11.89□□□□□ -0.51
PTPN6-201ENST00000318974 KHNYNO15037 678 aaKnown RBP11.89□□□□□ -0.51
PTPN6-201ENST00000318974 PRKRAO75569 313 aaKnown RBP11.89□□□□□ -0.51
PTPN6-201ENST00000318974 CTSBP07858 339 aa11.89□□□□□ -0.51
PTPN6-201ENST00000318974 BUD31P41223 144 aaPredicted RBP11.89□□□□□ -0.51
PTPN6-201ENST00000318974 FRKP42685 505 aaPredicted RBP11.89□□□□□ -0.51
PTPN6-201ENST00000318974 ARL4DP49703 201 aa11.89□□□□□ -0.51
PTPN6-201ENST00000318974 GP2P55259 537 aaKnown RBP11.89□□□□□ -0.51
PTPN6-201ENST00000318974 RPP38P78345 283 aaKnown RBP11.89□□□□□ -0.51
PTPN6-201ENST00000318974 CDK6Q00534 326 aa11.89□□□□□ -0.51
PTPN6-201ENST00000318974 MVKQ03426 396 aa11.89□□□□□ -0.51
PTPN6-201ENST00000318974 NPTX1Q15818 432 aa11.89□□□□□ -0.51
PTPN6-201ENST00000318974 MOGQ16653 247 aa11.89□□□□□ -0.51
PTPN6-201ENST00000318974 NDUFA9Q16795 377 aa11.89□□□□□ -0.51
PTPN6-201ENST00000318974 PRTGQ2VWP7 1150 aa11.89□□□□□ -0.51
PTPN6-201ENST00000318974 CRB2Q5IJ48 1285 aa11.89□□□□□ -0.51
PTPN6-201ENST00000318974 PERM1Q5SV97 790 aa11.89□□□□□ -0.51
PTPN6-201ENST00000318974 C18orf63Q68DL7 685 aa11.89□□□□□ -0.51
PTPN6-201ENST00000318974 FAM180BQ6P0A1 224 aa11.89□□□□□ -0.51
PTPN6-201ENST00000318974 ZC3H14Q6PJT7 736 aaKnown RBP11.89□□□□□ -0.51
PTPN6-201ENST00000318974 TSEN54Q7Z6J9 526 aaKnown RBP11.89□□□□□ -0.51
PTPN6-201ENST00000318974 SVOPQ8N4V2 548 aa11.89□□□□□ -0.51
PTPN6-201ENST00000318974 B4GALNT2Q8NHY0 566 aa11.89□□□□□ -0.51
PTPN6-201ENST00000318974 NFKBIDQ8NI38 313 aa11.89□□□□□ -0.51
PTPN6-201ENST00000318974 IPCEF1Q8WWN9 437 aaPredicted RBP11.89□□□□□ -0.51
PTPN6-201ENST00000318974 RORBQ92753 470 aa11.89□□□□□ -0.51
PTPN6-201ENST00000318974 NAT6Q93015 286 aa11.89□□□□□ -0.51
PTPN6-201ENST00000318974 BORCS5Q969J3 196 aa11.89□□□□□ -0.51
PTPN6-201ENST00000318974 ZNF285Q96NJ3 590 aa11.89□□□□□ -0.51
PTPN6-201ENST00000318974 CSF3RQ99062 836 aa11.89□□□□□ -0.51
PTPN6-201ENST00000318974 SEMA5BQ9P283 1151 aa11.89□□□□□ -0.51
PTPN6-201ENST00000318974 CCDC88CQ9P219 2028 aa11.89□□□□□ -0.51
PTPN6-201ENST00000318974 SH3PXD2BA1X283 911 aa11.88□□□□□ -0.51
PTPN6-201ENST00000318974 A8MVJ9 347 aa11.88□□□□□ -0.51
PTPN6-201ENST00000318974 GALR3O60755 368 aaPredicted RBP11.88□□□□□ -0.51
PTPN6-201ENST00000318974 INMTO95050 263 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms