RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 PHF21BQ96EK2 531 aa12.07□□□□□ -0.48
SYCN-201ENST00000318438 CENPKQ9BS16 269 aa12.07□□□□□ -0.48
SYCN-201ENST00000318438 LYRM4Q9HD34 91 aa12.07□□□□□ -0.48
SYCN-201ENST00000318438 PRTFDC1Q9NRG1 225 aa12.07□□□□□ -0.48
SYCN-201ENST00000318438 SACM1LQ9NTJ5 587 aa12.07□□□□□ -0.48
SYCN-201ENST00000318438 MYOTQ9UBF9 498 aa12.07□□□□□ -0.48
SYCN-201ENST00000318438 PCTPQ9UKL6 214 aa12.07□□□□□ -0.48
SYCN-201ENST00000318438 USF3Q68DE3 2245 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 C15orf38-AP3S2A0A0A6YYH1 394 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 CYR61O00622 381 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 OR7A17O14581 309 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 SPRY1O43609 319 aaPredicted RBP12.06□□□□□ -0.48
SYCN-201ENST00000318438 ZNF354AO60765 605 aaPredicted RBP12.06□□□□□ -0.48
SYCN-201ENST00000318438 CLDN9O95484 217 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 P04436 131 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 RPS17P08708 135 aaKnown RBP12.06□□□□□ -0.48
SYCN-201ENST00000318438 SBK3P0C264 359 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 ATP5A1P25705 553 aaKnown RBP12.06□□□□□ -0.48
SYCN-201ENST00000318438 SSR2P43308 183 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 CPA2P48052 419 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 HNRNPFP52597 415 aaKnown RBP12.06□□□□□ -0.48
SYCN-201ENST00000318438 ARFIP1P53367 373 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 SLC13A2Q13183 592 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 DDX39BQ13838 428 aaKnown RBP12.06□□□□□ -0.48
SYCN-201ENST00000318438 VEZF1Q14119 521 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 CPSF6Q16630 551 aaKnown RBP eCLIP12.06□□□□□ -0.48
SYCN-201ENST00000318438 WIPI1Q5MNZ9 446 aaPredicted RBP12.06□□□□□ -0.48
SYCN-201ENST00000318438 DEPDC1Q5TB30 811 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 NSUN5P2Q63ZY6 315 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 LIX1Q8N485 282 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 TMEM151AQ8N4L1 468 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 ACOT4Q8N9L9 421 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 TMEM52Q8NDY8 209 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 OR52B6Q8NGF0 335 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 ACMSDQ8TDX5 336 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 HS3ST6Q96QI5 342 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 TRIB1Q96RU8 372 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 CSF3RQ99062 836 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 MTERF1Q99551 399 aaKnown RBP12.06□□□□□ -0.48
SYCN-201ENST00000318438 NTMT1Q9BV86 223 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 C1QTNF3Q9BXJ4 246 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 AMBRA1Q9C0C7 1298 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 OR51B5Q9H339 312 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 NOL11Q9H8H0 719 aaKnown RBP12.06□□□□□ -0.48
SYCN-201ENST00000318438 PPCSQ9HAB8 311 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 PRM3Q9NNZ6 103 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 NDRG3Q9UGV2 375 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 SPACA6W5XKT8 324 aa12.06□□□□□ -0.48
SYCN-201ENST00000318438 A8MT66 165 aa12.05□□□□□ -0.48
SYCN-201ENST00000318438 TGFBR3LH3BV60 316 aa12.05□□□□□ -0.48
SYCN-201ENST00000318438 FOXE1O00358 373 aaPredicted RBP12.05□□□□□ -0.48
SYCN-201ENST00000318438 RTCAO00442 366 aaKnown RBP12.05□□□□□ -0.48
SYCN-201ENST00000318438 CTIFO43310 598 aaKnown RBP12.05□□□□□ -0.48
SYCN-201ENST00000318438 ERN1O75460 977 aaKnown RBP12.05□□□□□ -0.48
SYCN-201ENST00000318438 ARL1P40616 181 aaPredicted RBP12.05□□□□□ -0.48
SYCN-201ENST00000318438 CCNG1P51959 295 aa12.05□□□□□ -0.48
SYCN-201ENST00000318438 RAP1GDS1P52306 607 aa12.05□□□□□ -0.48
SYCN-201ENST00000318438 ATP5J2P56134 94 aa12.05□□□□□ -0.48
SYCN-201ENST00000318438 CRYZQ08257 329 aaKnown RBP12.05□□□□□ -0.48
SYCN-201ENST00000318438 FOXF2Q12947 444 aa12.05□□□□□ -0.48
SYCN-201ENST00000318438 TRAF3Q13114 568 aa12.05□□□□□ -0.48
SYCN-201ENST00000318438 AP5B1Q2VPB7 878 aa12.05□□□□□ -0.48
SYCN-201ENST00000318438 GGTA1PQ4G0N0 100 aa12.05□□□□□ -0.48
SYCN-201ENST00000318438 OR4C11Q6IEV9 310 aa12.05□□□□□ -0.48
SYCN-201ENST00000318438 RNF175Q8N4F7 328 aa12.05□□□□□ -0.48
SYCN-201ENST00000318438 GOLM1Q8NBJ4 401 aa12.05□□□□□ -0.48
SYCN-201ENST00000318438 WDR20Q8TBZ3 569 aa12.05□□□□□ -0.48
SYCN-201ENST00000318438 MZB1Q8WU39 189 aa12.05□□□□□ -0.48
SYCN-201ENST00000318438 UBLCP1Q8WVY7 318 aaPredicted RBP12.05□□□□□ -0.48
SYCN-201ENST00000318438 IGFBPL1Q8WX77 278 aa12.05□□□□□ -0.48
SYCN-201ENST00000318438 ATP6V1E2Q96A05 226 aa12.05□□□□□ -0.48
SYCN-201ENST00000318438 RGMAQ96B86 450 aa12.05□□□□□ -0.48
SYCN-201ENST00000318438 NSUN5Q96P11 429 aaKnown RBP12.05□□□□□ -0.48
SYCN-201ENST00000318438 CDK15Q96Q40 435 aa12.05□□□□□ -0.48
SYCN-201ENST00000318438 TIMP4Q99727 224 aa12.05□□□□□ -0.48
SYCN-201ENST00000318438 REG4Q9BYZ8 158 aa12.05□□□□□ -0.48
SYCN-201ENST00000318438 PLA2G12AQ9BZM1 189 aa12.05□□□□□ -0.48
SYCN-201ENST00000318438 ZBTB26Q9HCK0 441 aa12.05□□□□□ -0.48
SYCN-201ENST00000318438 KLHL28Q9NXS3 571 aa12.05□□□□□ -0.48
SYCN-201ENST00000318438 PSD3Q9NYI0 1048 aa12.05□□□□□ -0.48
SYCN-201ENST00000318438 RNF11Q9Y3C5 154 aa12.05□□□□□ -0.48
SYCN-201ENST00000318438 DSCAMO60469 2012 aa12.04□□□□□ -0.48
SYCN-201ENST00000318438 MBD3L3A6NE82 208 aaPredicted RBP12.04□□□□□ -0.48
SYCN-201ENST00000318438 LRRC3CA6NJW4 275 aa12.04□□□□□ -0.48
SYCN-201ENST00000318438 A8MV72 311 aaPredicted RBP12.04□□□□□ -0.48
SYCN-201ENST00000318438 SAP18O00422 153 aaKnown RBP12.04□□□□□ -0.48
SYCN-201ENST00000318438 PLPP1O14494 284 aa12.04□□□□□ -0.48
SYCN-201ENST00000318438 CTNSO60931 367 aa12.04□□□□□ -0.48
SYCN-201ENST00000318438 SH3BGRLO75368 114 aa12.04□□□□□ -0.48
SYCN-201ENST00000318438 IL18BPO95998 194 aa12.04□□□□□ -0.48
SYCN-201ENST00000318438 OTCP00480 354 aa12.04□□□□□ -0.48
SYCN-201ENST00000318438 GSTA1P08263 222 aa12.04□□□□□ -0.48
SYCN-201ENST00000318438 TMIGD3P0DMS9 266 aaPredicted RBP12.04□□□□□ -0.48
SYCN-201ENST00000318438 PAX1P15863 534 aa12.04□□□□□ -0.48
SYCN-201ENST00000318438 TAC1P20366 129 aa12.04□□□□□ -0.48
SYCN-201ENST00000318438 PTX3P26022 381 aaPredicted RBP12.04□□□□□ -0.48
SYCN-201ENST00000318438 HK2P52789 917 aa12.04□□□□□ -0.48
SYCN-201ENST00000318438 RPS13P62277 151 aaKnown RBP12.04□□□□□ -0.48
SYCN-201ENST00000318438 DUSP8Q13202 625 aa12.04□□□□□ -0.48
SYCN-201ENST00000318438 CUL3Q13618 768 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms