RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 CPEB2Q7Z5Q1 589 aaKnown RBP14.35□□□□□ -0.11
PDLIM5-202ENST00000318007 PGAM4Q8N0Y7 254 aa14.35□□□□□ -0.11
PDLIM5-202ENST00000318007 PLPP5Q8NEB5 264 aa14.35□□□□□ -0.11
PDLIM5-202ENST00000318007 MCUR1Q96AQ8 359 aa14.35□□□□□ -0.11
PDLIM5-202ENST00000318007 GAL3ST4Q96RP7 486 aa14.35□□□□□ -0.11
PDLIM5-202ENST00000318007 MGAQ8IWI9 3026 aa14.35□□□□□ -0.11
PDLIM5-202ENST00000318007 ZZEF1O43149 2961 aa14.35□□□□□ -0.11
PDLIM5-202ENST00000318007 TRBV5-3A0A0A0MS03 114 aa14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 DXOO77932 396 aaKnown RBP14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 RASSF2P50749 326 aa14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 KCNJ2P63252 427 aa14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 RUNDC3AQ59EK9 446 aa14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 KIRREL2Q6UWL6 708 aa14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 BNC2Q6ZN30 1099 aaPredicted RBP14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 SLC15A3Q8IY34 581 aa14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 NATD1Q8N6N6 113 aa14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 GOT1L1Q8NHS2 421 aaPredicted RBP14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 KIAA1143Q96AT1 154 aaPredicted RBP14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 ECSITQ9BQ95 431 aa14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 CPPED1Q9BRF8 314 aaPredicted RBP14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 CADM1Q9BY67 442 aaKnown RBP14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 SERHL2Q9H4I8 314 aa14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 EMC8O43402 210 aa14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 DYRK3O43781 588 aa14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 CORO7P57737 925 aa14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 ZNF155Q12901 538 aaPredicted RBP14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 BTBD16Q32M84 506 aa14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 C16orf47Q6ZP98 133 aaPredicted RBP14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 HPS6Q86YV9 775 aa14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 OR2L13Q8N349 312 aa14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 NCLNQ969V3 563 aa14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 TMEM125Q96AQ2 219 aa14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 SLC35G5Q96KT7 338 aa14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 LPAR4Q99677 370 aa14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 GPATCH1Q9BRR8 931 aaKnown RBP14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 OR10A5Q9H207 317 aa14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 C3orf14Q9HBI5 128 aa14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 ZNF160Q9HCG1 818 aa14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 EGFL7Q9UHF1 273 aa14.34□□□□□ -0.11
PDLIM5-202ENST00000318007 PRORSD1PA6NEY8 169 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 EVPLLA8MZ36 301 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 C21orf140B9A014 251 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 TLX3O43711 291 aaPredicted RBP14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 ATP5HO75947 161 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 DDAH2O95865 285 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 WT1P19544 449 aaPredicted RBP14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 S1PR1P21453 382 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 MATN1P21941 496 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 MMP11P24347 488 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 CD82P27701 267 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 PGM1P36871 562 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 LRRC74AQ0VAA2 488 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 CYP51A1Q16850 503 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 LACTB2Q53H82 288 aaPredicted RBP14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 CPZQ66K79 652 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 C8orf82Q6P1X6 216 aaPredicted RBP14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 PPP1R32Q7Z5V6 425 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 HMGN2P46Q86SG4 172 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 HORMAD2Q8N7B1 307 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 SLC16A11Q8NCK7 471 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 C16orf52Q8NHV5 167 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 DAZLQ92904 295 aaKnown RBP14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 CTHRC1Q96CG8 243 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 DCBLD2Q96PD2 775 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 HOPXQ9BPY8 73 aaPredicted RBP14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 WDR77Q9BQA1 342 aaPredicted RBP14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 NUDT9Q9BW91 350 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 LRMDAQ9H2I8 198 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 OR51I1Q9H343 314 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 C19orf25Q9UFG5 118 aaPredicted RBP14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 KCND3Q9UK17 655 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 KCNE3Q9Y6H6 103 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 SPENQ96T58 3664 aaKnown RBP14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 PCSK5Q92824 1860 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 SOCS6O14544 535 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 TERTO14746 1132 aaKnown RBP14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 GSC2O15499 205 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 KLK10O43240 276 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 DNAJC8O75937 253 aaPredicted RBP14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 RAB40ALP0C0E4 278 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 OR12D1P0DN82 309 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 COX6A1P12074 109 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 LIPEQ05469 1076 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 CLN3Q13286 438 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 ATP1A4Q13733 1029 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 CEACAM7Q14002 265 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 RGNQ15493 299 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 FHL5Q5TD97 284 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 SAXO2Q658L1 398 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 TMEM205Q6UW68 189 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 OR11G2Q8NGC1 345 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 PSMA8Q8TAA3 256 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 ZNF675Q8TD23 568 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 ZNF721Q8TF20 911 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 XAGE5Q8WWM1 108 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 PIK3R3Q92569 461 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 GIMAP5Q96F15 307 aa14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 ZNF578Q96N58 590 aaPredicted RBP14.33□□□□□ -0.12
PDLIM5-202ENST00000318007 MS4A4EQ96PG1 132 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms