RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 GNG14A0A1W2PPG7 69 aa16.3■□□□□ 0.2
TPM1-203ENST00000317516 TRIM3O75382 744 aaPredicted RBP16.3■□□□□ 0.2
TPM1-203ENST00000317516 S1PR1P21453 382 aa16.3■□□□□ 0.2
TPM1-203ENST00000317516 ELAVL4P26378 380 aaKnown RBP16.3■□□□□ 0.2
TPM1-203ENST00000317516 GDF1P27539 372 aa16.3■□□□□ 0.2
TPM1-203ENST00000317516 MASP1P48740 699 aa16.3■□□□□ 0.2
TPM1-203ENST00000317516 DCAF7P61962 342 aa16.3■□□□□ 0.2
TPM1-203ENST00000317516 ACSM2AQ08AH3 577 aa16.3■□□□□ 0.2
TPM1-203ENST00000317516 HEPACAMQ14CZ8 416 aa16.3■□□□□ 0.2
TPM1-203ENST00000317516 SPIN4Q56A73 249 aa16.3■□□□□ 0.2
TPM1-203ENST00000317516 ACSM2BQ68CK6 577 aa16.3■□□□□ 0.2
TPM1-203ENST00000317516 CCDC71Q8IV32 467 aaPredicted RBP16.3■□□□□ 0.2
TPM1-203ENST00000317516 ZNF295-AS1Q8N0V1 137 aa16.3■□□□□ 0.2
TPM1-203ENST00000317516 RPRMLQ8N4K4 120 aa16.3■□□□□ 0.2
TPM1-203ENST00000317516 HSPBAP1Q96EW2 488 aa16.3■□□□□ 0.2
TPM1-203ENST00000317516 ANGPTL4Q9BY76 406 aa16.3■□□□□ 0.2
TPM1-203ENST00000317516 TXLNGYQ9BZA5 131 aa16.3■□□□□ 0.2
TPM1-203ENST00000317516 PFDN4Q9NQP4 134 aa16.3■□□□□ 0.2
TPM1-203ENST00000317516 TNFRSF10DQ9UBN6 386 aa16.3■□□□□ 0.2
TPM1-203ENST00000317516 UTS2RQ9UKP6 389 aa16.3■□□□□ 0.2
TPM1-203ENST00000317516 LRRC3CA6NJW4 275 aa16.29■□□□□ 0.2
TPM1-203ENST00000317516 FAM90A27PA6NNH2 459 aa16.29■□□□□ 0.2
TPM1-203ENST00000317516 H3BQF6 201 aa16.29■□□□□ 0.2
TPM1-203ENST00000317516 ACOX3O15254 700 aa16.29■□□□□ 0.2
TPM1-203ENST00000317516 TRAPPC6AO75865 159 aa16.29■□□□□ 0.2
TPM1-203ENST00000317516 BCAS2O75934 225 aaPredicted RBP16.29■□□□□ 0.2
TPM1-203ENST00000317516 GLI4P10075 376 aa16.29■□□□□ 0.2
TPM1-203ENST00000317516 CAPN3P20807 821 aa16.29■□□□□ 0.2
TPM1-203ENST00000317516 GPX3P22352 226 aa16.29■□□□□ 0.2
TPM1-203ENST00000317516 ABCD3P28288 659 aa16.29■□□□□ 0.2
TPM1-203ENST00000317516 ZFP36L2P47974 494 aaKnown RBP16.29■□□□□ 0.2
TPM1-203ENST00000317516 CCT5P48643 541 aa16.29■□□□□ 0.2
TPM1-203ENST00000317516 SF3B4Q15427 424 aaKnown RBP eCLIP16.29■□□□□ 0.21e-9■■□□□ 12.9
TPM1-203ENST00000317516 TCHHL1Q5QJ38 904 aaPredicted RBP16.29■□□□□ 0.2
TPM1-203ENST00000317516 C1orf185Q5T7R7 199 aa16.29■□□□□ 0.2
TPM1-203ENST00000317516 FAM111BQ6SJ93 734 aa16.29■□□□□ 0.2
TPM1-203ENST00000317516 NUP54Q7Z3B4 507 aa16.29■□□□□ 0.2
TPM1-203ENST00000317516 CCNYL1Q8N7R7 359 aa16.29■□□□□ 0.2
TPM1-203ENST00000317516 ACBD4Q8NC06 268 aa16.29■□□□□ 0.2
TPM1-203ENST00000317516 LCORQ96JN0 433 aaPredicted RBP16.29■□□□□ 0.2
TPM1-203ENST00000317516 LURAP1Q96LR2 239 aa16.29■□□□□ 0.2
TPM1-203ENST00000317516 RILPQ96NA2 401 aa16.29■□□□□ 0.2
TPM1-203ENST00000317516 UCK2Q9BZX2 261 aa16.29■□□□□ 0.2
TPM1-203ENST00000317516 NXF5Q9H1B4 397 aaKnown RBP16.29■□□□□ 0.2
TPM1-203ENST00000317516 PPCSQ9HAB8 311 aa16.29■□□□□ 0.2
TPM1-203ENST00000317516 SLC24A3Q9HC58 644 aa16.29■□□□□ 0.2
TPM1-203ENST00000317516 GIMAP4Q9NUV9 329 aa16.29■□□□□ 0.2
TPM1-203ENST00000317516 MAT2BQ9NZL9 334 aa16.29■□□□□ 0.2
TPM1-203ENST00000317516 ZNF639Q9UID6 485 aa16.29■□□□□ 0.2
TPM1-203ENST00000317516 DLGAP4Q9Y2H0 992 aa16.29■□□□□ 0.2
TPM1-203ENST00000317516 NKX2-6A6NCS4 301 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 AHRRA9YTQ3 701 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 PCDH7O60245 1069 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 GLRA3O75311 464 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 PPM1BO75688 479 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 TOXO94900 526 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 LRATO95237 230 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 ABCB1P08183 1280 aaPredicted RBP16.28■□□□□ 0.2
TPM1-203ENST00000317516 MYL2P10916 166 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 CASP3P42574 277 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 GSTM5P46439 218 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 MGAT2Q10469 447 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 PRR22Q8IZ63 422 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 CLYBLQ8N0X4 340 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 MMP21Q8N119 569 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 ADCY4Q8NFM4 1077 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 CTHRC1Q96CG8 243 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 ERP27Q96DN0 273 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 CNRIP1Q96F85 164 aaPredicted RBP16.28■□□□□ 0.2
TPM1-203ENST00000317516 ZNF681Q96N22 645 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 TREX2Q9BQ50 279 aaPredicted RBP16.28■□□□□ 0.2
TPM1-203ENST00000317516 ACPTQ9BZG2 426 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 SHCBP1LQ9BZQ2 653 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 SLC6A15Q9H2J7 730 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 METTL7AQ9H8H3 244 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 MID1IP1Q9NPA3 183 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 SPRR3Q9UBC9 169 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 GRID1Q9ULK0 1009 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 FAM215AQ9Y5M1 114 aa16.28■□□□□ 0.2
TPM1-203ENST00000317516 ZNF407Q9C0G0 2248 aa16.27■□□□□ 0.2
TPM1-203ENST00000317516 LRBAP50851 2863 aa16.27■□□□□ 0.2
TPM1-203ENST00000317516 C15orf38-AP3S2A0A0A6YYH1 394 aa16.27■□□□□ 0.2
TPM1-203ENST00000317516 SERTM1A2A2V5 107 aa16.27■□□□□ 0.2
TPM1-203ENST00000317516 IL3P08700 152 aa16.27■□□□□ 0.2
TPM1-203ENST00000317516 CHN1P15882 459 aa16.27■□□□□ 0.2
TPM1-203ENST00000317516 ENDOUP21128 410 aaKnown RBP16.27■□□□□ 0.2
TPM1-203ENST00000317516 DRD5P21918 477 aa16.27■□□□□ 0.2
TPM1-203ENST00000317516 PPICP45877 212 aa16.27■□□□□ 0.2
TPM1-203ENST00000317516 TRPC1P48995 793 aa16.27■□□□□ 0.2
TPM1-203ENST00000317516 DUSP8Q13202 625 aa16.27■□□□□ 0.2
TPM1-203ENST00000317516 EXOSC7Q15024 291 aaKnown RBP16.27■□□□□ 0.2
TPM1-203ENST00000317516 CCDC153Q494R4 210 aa16.27■□□□□ 0.2
TPM1-203ENST00000317516 TRMT12Q53H54 448 aaKnown RBP16.27■□□□□ 0.2
TPM1-203ENST00000317516 CFAP157Q5JU67 520 aa16.27■□□□□ 0.2
TPM1-203ENST00000317516 SPDYAQ5MJ70 313 aa16.27■□□□□ 0.2
TPM1-203ENST00000317516 RTL6Q6ICC9 239 aa16.27■□□□□ 0.2
TPM1-203ENST00000317516 SLC30A6Q6NXT4 461 aa16.27■□□□□ 0.2
TPM1-203ENST00000317516 ZYG11AQ6WRX3 759 aa16.27■□□□□ 0.2
TPM1-203ENST00000317516 PM20D2Q8IYS1 436 aa16.27■□□□□ 0.2
TPM1-203ENST00000317516 CCDC116Q8IYX3 515 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms