RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 GABRB1P18505 474 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 UGT2B10P36537 528 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 SLC19A1P41440 591 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 PI4KAP42356 2102 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 BLKP51451 505 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 CRISP1P54107 249 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 NCS1P62166 190 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 RPS26P62854 115 aaKnown RBP13.37□□□□□ -0.27
VRK3-201ENST00000316763 CSNK1G2P78368 415 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 PRDX1Q06830 199 aaKnown RBP13.37□□□□□ -0.27
VRK3-201ENST00000316763 KRT33BQ14525 404 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 TMEM35AQ53FP2 167 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 FAM180BQ6P0A1 224 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 OR6Q1Q8NGQ2 317 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 SNRNP27Q8WVK2 155 aaKnown RBP13.37□□□□□ -0.27
VRK3-201ENST00000316763 GSDMCQ9BYG8 508 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 NMNAT1Q9HAN9 279 aaPredicted RBP13.37□□□□□ -0.27
VRK3-201ENST00000316763 TAS2R7Q9NYW3 318 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.37□□□□□ -0.27
VRK3-201ENST00000316763 NINQ8N4C6 2090 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 TLR4O00206 839 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 AIREO43918 545 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 TMPRSS11DO60235 418 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 CNOT3O75175 753 aaKnown RBP13.37□□□□□ -0.27
VRK3-201ENST00000316763 MFN2O95140 757 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 ADAP00813 363 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 SERPIND1P05546 499 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 C21orf33P30042 268 aaPredicted RBP13.37□□□□□ -0.27
VRK3-201ENST00000316763 IDUAP35475 653 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 SSR2P43308 183 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 MAGEA8P43361 318 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 ANXA11P50995 505 aaKnown RBP13.37□□□□□ -0.27
VRK3-201ENST00000316763 OLR1P78380 273 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 TP53BP2Q13625 1128 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 PTGES3Q15185 160 aaKnown RBP13.37□□□□□ -0.27
VRK3-201ENST00000316763 TCEA2Q15560 299 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 LPAL2Q16609 132 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 ZNF542PQ5EBM4 170 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 RPS26P11Q5JNZ5 115 aaPredicted RBP13.37□□□□□ -0.27
VRK3-201ENST00000316763 TBC1D19Q8N5T2 526 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 PSMA8Q8TAA3 256 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 ZNF675Q8TD23 568 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 SLC35G5Q96KT7 338 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 TEFMQ96QE5 360 aaKnown RBP13.37□□□□□ -0.27
VRK3-201ENST00000316763 PRRX2Q99811 253 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 ABCG4Q9H172 646 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 AMBNQ9NP70 447 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 LHX9Q9NQ69 397 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 SIRT3Q9NTG7 399 aaPredicted RBP13.37□□□□□ -0.27
VRK3-201ENST00000316763 TMEM74BQ9NUR3 256 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 EHD3Q9NZN3 535 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 P2RX2Q9UBL9 471 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 MGAT4BQ9UQ53 548 aa13.37□□□□□ -0.27
VRK3-201ENST00000316763 ZAR1LA6NP61 321 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 HMGN4O00479 90 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 FAAHO00519 579 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 BCAT2O15382 392 aaPredicted RBP13.36□□□□□ -0.27
VRK3-201ENST00000316763 SLC28A2O43868 658 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 KDM1AO60341 852 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 GUCY1B2O75343 617 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 GASTP01350 101 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 CSF2P04141 144 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 STSP08842 583 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 PPP2R1BP30154 601 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 NTSP30990 170 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 GPC1P35052 558 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 NUDT6P53370 316 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 ST3GAL4Q11206 333 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 PUM1Q14671 1186 aaKnown RBP eCLIP13.36□□□□□ -0.27
VRK3-201ENST00000316763 INAQ16352 499 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 SYT16Q17RD7 645 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 TRIM16LQ309B1 348 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 DCST1Q5T197 706 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 FRMPD2BQ6IN97 320 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 NIPAL1Q6NVV3 410 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 KLHL17Q6TDP4 642 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 PTCHD4Q6ZW05 846 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 KRT73Q86Y46 540 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 MINDY2Q8NBR6 621 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 APOBEC4Q8WW27 367 aaKnown RBP13.36□□□□□ -0.27
VRK3-201ENST00000316763 RAB8BQ92930 207 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 ZNF354BQ96LW1 612 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 TWSG1Q9GZX9 223 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 XKR8Q9H6D3 395 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 MS4A12Q9NXJ0 267 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 GPR83Q9NYM4 423 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 CNOT2Q9NZN8 540 aaKnown RBP13.36□□□□□ -0.27
VRK3-201ENST00000316763 RHCGQ9UBD6 479 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 SEC14L3Q9UDX4 400 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 OSGIN1Q9UJX0 560 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 PILRBQ9UKJ0 227 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 KNL1Q8NG31 2342 aa13.36□□□□□ -0.27
VRK3-201ENST00000316763 TP53BP1Q12888 1972 aaPredicted RBP13.35□□□□□ -0.27
VRK3-201ENST00000316763 A0A0A6YYD5 115 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 M0R082 166 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 PRICKLE3O43900 615 aaPredicted RBP13.35□□□□□ -0.27
VRK3-201ENST00000316763 LCMT2O60294 686 aaKnown RBP13.35□□□□□ -0.27
VRK3-201ENST00000316763 RECKO95980 971 aa13.35□□□□□ -0.27
VRK3-201ENST00000316763 RPLP0P05388 317 aaKnown RBP13.35□□□□□ -0.27
VRK3-201ENST00000316763 H1F0P07305 194 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms