RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 ACOT4Q8N9L9 421 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 C7orf57Q8NEG2 295 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 TSTD1Q8NFU3 115 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 OR5T3Q8NGG3 340 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 CREB3L4Q8TEY5 395 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 KAT2AQ92830 837 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 FEVQ99581 238 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 NIPSNAP1Q9BPW8 284 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 PSD2Q9BQI7 771 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 TIMM29Q9BSF4 260 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 CDADC1Q9BWV3 514 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 ITPAQ9BY32 194 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 HOXD1Q9GZZ0 328 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 REEP1Q9H902 201 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 HRASLS2Q9NWW9 162 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 TRPC4Q9UBN4 977 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 APOBEC3BQ9UH17 382 aaKnown RBP7.18□□□□□ -1.26
TRIM55-202ENST00000315962 OSGIN1Q9UJX0 560 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 NAALAD2Q9Y3Q0 740 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 COLEC10Q9Y6Z7 277 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 BDP1A6H8Y1 2624 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 AGAP5A6NIR3 686 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 TAF4O00268 1085 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 CAPN5O15484 640 aaPredicted RBP7.18□□□□□ -1.26
TRIM55-202ENST00000315962 CCNDBP1O95273 360 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 CSF2P04141 144 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 IGFBP1P08833 259 aaPredicted RBP7.18□□□□□ -1.26
TRIM55-202ENST00000315962 ALOX5P09917 674 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 ZNF888P0CJ79 500 aaPredicted RBP7.18□□□□□ -1.26
TRIM55-202ENST00000315962 PKLRP30613 574 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 AKT2P31751 481 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 RYKP34925 604 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 NCBP2P52298 156 aaKnown RBP eCLIP7.18□□□□□ -1.26
TRIM55-202ENST00000315962 CDH12P55289 794 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 MAZP56270 477 aaKnown RBP7.18□□□□□ -1.26
TRIM55-202ENST00000315962 SIM1P81133 766 aaPredicted RBP7.18□□□□□ -1.26
TRIM55-202ENST00000315962 DBPQ10586 325 aaPredicted RBP7.18□□□□□ -1.26
TRIM55-202ENST00000315962 HYAL2Q12891 473 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 TOP3AQ13472 1001 aaPredicted RBP7.18□□□□□ -1.26
TRIM55-202ENST00000315962 TDGQ13569 410 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 LTB4RQ15722 352 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 BCL2A1Q16548 175 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 KDM4DQ6B0I6 523 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 PTCRAQ6ISU1 281 aaPredicted RBP7.18□□□□□ -1.26
TRIM55-202ENST00000315962 TMEM107Q6UX40 140 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 RNF165Q6ZSG1 346 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 USP43Q70EL4 1123 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 CCDC80Q76M96 950 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 CYP4Z2PQ8N1L4 340 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 CHCHD4Q8N4Q1 142 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 METTL27Q8N6F8 245 aaPredicted RBP7.18□□□□□ -1.26
TRIM55-202ENST00000315962 HORMAD2Q8N7B1 307 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 SLC37A2Q8TED4 501 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 RGMAQ96B86 450 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 MS4A6EQ96DS6 147 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 ITPKCQ96DU7 683 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 WDR34Q96EX3 536 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 ZNF486Q96H40 463 aaPredicted RBP7.18□□□□□ -1.26
TRIM55-202ENST00000315962 FCRL1Q96LA6 429 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 APOL4Q9BPW4 351 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 PHF7Q9BWX1 381 aaPredicted RBP7.18□□□□□ -1.26
TRIM55-202ENST00000315962 RSPO3Q9BXY4 272 aaPredicted RBP7.18□□□□□ -1.26
TRIM55-202ENST00000315962 MMP28Q9H239 520 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 NECTIN3Q9NQS3 549 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 FBXO8Q9NRD0 319 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 PCDHGA6Q9Y5G7 932 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 GPR179Q6PRD1 2367 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 SEC16AO15027 2179 aa7.18□□□□□ -1.26
TRIM55-202ENST00000315962 PRAMEF25A6NGN4 478 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 METTL15A6NJ78 407 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 FAM220BPB1ANY3 271 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 FAM47E-STBD1D6RA91 191 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 RNASET2O00584 256 aaKnown RBP7.17□□□□□ -1.26
TRIM55-202ENST00000315962 P2RX6O15547 441 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 PRKNO60260 465 aaPredicted RBP7.17□□□□□ -1.26
TRIM55-202ENST00000315962 GPR37L1O60883 481 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 SOX14O95416 240 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 ERGP11308 486 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 F3P13726 295 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 DDCP20711 480 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 SOX3P41225 446 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 CTSKP43235 329 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 RAB15P59190 212 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 SCARB2Q14108 478 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 ARHGAP19Q14CB8 494 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 TSTQ16762 297 aaKnown RBP7.17□□□□□ -1.26
TRIM55-202ENST00000315962 LEXMQ3ZCV2 418 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 ARMCX4Q5H9R4 360 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 ANXA8L1Q5VT79 327 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 THOC7Q6I9Y2 204 aaKnown RBP7.17□□□□□ -1.26
TRIM55-202ENST00000315962 FBXO42Q6P3S6 717 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 NRARPQ7Z6K4 114 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 ABI3BPQ7Z7G0 1075 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 SERPINA11Q86U17 422 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 NUDT13Q86X67 352 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 RBM45Q8IUH3 476 aaKnown RBP7.17□□□□□ -1.26
TRIM55-202ENST00000315962 FAM9CQ8IZT9 166 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 STX19Q8N4C7 294 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 SLC5A8Q8N695 610 aa7.17□□□□□ -1.26
TRIM55-202ENST00000315962 AMER2Q8N7J2 671 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms