RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 GSSP48637 474 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 ID2Q02363 134 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 GNA13Q14344 377 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 ELOCQ15369 112 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 SMN1Q16637 294 aaKnown RBP17.24■□□□□ 0.35
CCDC43-201ENST00000315286 GPR107Q5VW38 600 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 USP53Q70EK8 1073 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 TAGAPQ8N103 731 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 ARL14Q8N4G2 192 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 SIMC1Q8NDZ2 872 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 LMX1AQ8TE12 382 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 GTPBP3Q969Y2 492 aaKnown RBP17.24■□□□□ 0.35
CCDC43-201ENST00000315286 NODALQ96S42 347 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 TUBA1CQ9BQE3 449 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 MIR1-1HGQ9H1L0 117 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 CHRDQ9H2X0 955 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 VCX3AQ9NNX9 186 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 WNT16Q9UBV4 365 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 NAALAD2Q9Y3Q0 740 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 SPTBP11277 2137 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 A0A0G2JPF8 293 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 HNRNPCL2B2RXH8 293 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 HNRNPCL3B7ZW38 293 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 M0R3H8 397 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 EPPINO95925 133 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 GASTP01350 101 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 HNRNPCL4P0DMR1 293 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 CXCR4P61073 352 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 DEFB110Q30KQ9 67 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.24■□□□□ 0.35
CCDC43-201ENST00000315286 ZNF770Q6IQ21 691 aaPredicted RBP17.24■□□□□ 0.35
CCDC43-201ENST00000315286 ENTHD1Q8IYW4 607 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 ALDH16A1Q8IZ83 802 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 SAMD14Q8IZD0 417 aaPredicted RBP17.24■□□□□ 0.35
CCDC43-201ENST00000315286 SIX5Q8N196 739 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 AQP11Q8NBQ7 271 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 CADM4Q8NFZ8 388 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 CCDC3Q9BQI4 270 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 SPATA5L1Q9BVQ7 753 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 ACTRT3Q9BYD9 372 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 QRSL1Q9H0R6 528 aaKnown RBP17.24■□□□□ 0.35
CCDC43-201ENST00000315286 ZNF556Q9HAH1 456 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 NTMQ9P121 344 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 GALR3O60755 368 aaPredicted RBP17.23■□□□□ 0.35
CCDC43-201ENST00000315286 WBP4O75554 376 aaKnown RBP17.23■□□□□ 0.35
CCDC43-201ENST00000315286 UBXN7O94888 489 aa17.23■□□□□ 0.35
CCDC43-201ENST00000315286 CPMP14384 443 aa17.23■□□□□ 0.35
CCDC43-201ENST00000315286 CDH3P22223 829 aa17.23■□□□□ 0.35
CCDC43-201ENST00000315286 SOX18P35713 384 aa17.23■□□□□ 0.35
CCDC43-201ENST00000315286 GGT2P36268 569 aa17.23■□□□□ 0.35
CCDC43-201ENST00000315286 NUP107P57740 925 aa17.23■□□□□ 0.35
CCDC43-201ENST00000315286 RACK1P63244 317 aaKnown RBP17.23■□□□□ 0.35
CCDC43-201ENST00000315286 RPL6Q02878 288 aaKnown RBP17.23■□□□□ 0.35
CCDC43-201ENST00000315286 FGD3Q5JSP0 725 aa17.23■□□□□ 0.35
CCDC43-201ENST00000315286 TMEM52Q8NDY8 209 aa17.23■□□□□ 0.35
CCDC43-201ENST00000315286 OR13F1Q8NGS4 319 aa17.23■□□□□ 0.35
CCDC43-201ENST00000315286 ZFAND2BQ8WV99 257 aa17.23■□□□□ 0.35
CCDC43-201ENST00000315286 APH1BQ8WW43 257 aa17.23■□□□□ 0.35
CCDC43-201ENST00000315286 SLC35A4Q96G79 324 aa17.23■□□□□ 0.35
CCDC43-201ENST00000315286 BTBD2Q9BX70 525 aa17.23■□□□□ 0.35
CCDC43-201ENST00000315286 LHPPQ9H008 270 aa17.23■□□□□ 0.35
CCDC43-201ENST00000315286 IL21RQ9HBE5 538 aa17.23■□□□□ 0.35
CCDC43-201ENST00000315286 SDK1Q7Z5N4 2213 aa17.23■□□□□ 0.35
CCDC43-201ENST00000315286 CEP192Q8TEP8 1941 aa17.23■□□□□ 0.35
CCDC43-201ENST00000315286 SPAG17Q6Q759 2223 aa17.23■□□□□ 0.35
CCDC43-201ENST00000315286 CYR61O00622 381 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 ASNA1O43681 348 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 LDB3O75112 727 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 TRMUO75648 421 aaKnown RBP17.22■□□□□ 0.35
CCDC43-201ENST00000315286 CHRNEQ04844 493 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 SEC23BQ15437 767 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 PROX2Q3B8N5 592 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 DOK4Q8TEW6 326 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 C12orf43Q96C57 262 aaKnown RBP17.22■□□□□ 0.35
CCDC43-201ENST00000315286 ZG16BQ96DA0 208 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 SHDQ96IW2 340 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 DHRS1Q96LJ7 313 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 RHNO1Q9BSD3 238 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 CCDC90BQ9GZT6 254 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 SLC38A1Q9H2H9 487 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 DUSP21Q9H596 190 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 PRDM9Q9NQV7 894 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 ERVK-18Q9QC07 812 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 ACAD8Q9UKU7 415 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 DOLKQ9UPQ8 538 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 RNF6Q9Y252 685 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 TPRKBQ9Y3C4 175 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 SNX5Q9Y5X3 404 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 LAMA1P25391 3075 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 ARRDC5A6NEK1 342 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 SLC9B1P1A6NJY1 282 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 SEC14L2O76054 403 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 LGI1O95970 557 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 H1F0P07305 194 aaKnown RBP17.22■□□□□ 0.35
CCDC43-201ENST00000315286 PORP16435 677 aaPredicted RBP17.22■□□□□ 0.35
CCDC43-201ENST00000315286 ELAVL4P26378 380 aaKnown RBP17.22■□□□□ 0.35
CCDC43-201ENST00000315286 DCKP27707 260 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 FASLGP48023 281 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 SLC35A2P78381 396 aa17.22■□□□□ 0.35
CCDC43-201ENST00000315286 SHC2P98077 582 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms