RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 JRKO75564 520 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 GNSP15586 552 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 ATF4P18848 351 aaPredicted RBP13.1□□□□□ -0.31
SPAST-201ENST00000315285 CRHBPP24387 322 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 AK4P27144 223 aaPredicted RBP13.1□□□□□ -0.31
SPAST-201ENST00000315285 CPXM2Q8N436 756 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 CSNK1A1LQ8N752 337 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 TMEM102Q8N9M5 508 aaPredicted RBP13.1□□□□□ -0.31
SPAST-201ENST00000315285 SETD6Q8TBK2 473 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 FCAMRQ8WWV6 532 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 METTL2AQ96IZ6 378 aaKnown RBP13.1□□□□□ -0.31
SPAST-201ENST00000315285 PTCHD1Q96NR3 888 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 CPEB1Q9BZB8 566 aaKnown RBP13.1□□□□□ -0.31
SPAST-201ENST00000315285 SFXN1Q9H9B4 322 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 CPNE5Q9HCH3 593 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 C12orf4Q9NQ89 552 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 SPEF1Q9Y4P9 236 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 PCDH17O14917 1159 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 GGT2P36268 569 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 MAGEA2P43356 314 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 GPR143P51810 404 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 FAM189A2Q15884 450 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 SLC39A5Q6ZMH5 540 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 IGFN1Q86VF2 1251 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 DTX3Q8N9I9 347 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 SPERTQ8NA61 448 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 NOP16Q9Y3C1 178 aaKnown RBP13.1□□□□□ -0.31
SPAST-201ENST00000315285 GXYLT2A0PJZ3 443 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 LATO43561 262 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 HCRTR2O43614 444 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 RGS9O75916 674 aaPredicted RBP13.1□□□□□ -0.31
SPAST-201ENST00000315285 PRH1P02810 166 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 ZNF81P51508 661 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 CHAF1BQ13112 559 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 GAS6Q14393 721 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 ZNF791Q3KP31 576 aaPredicted RBP13.1□□□□□ -0.31
SPAST-201ENST00000315285 FAM86B1Q8N7N1 296 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 OR4K17Q8NGC6 315 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 THAP4Q8WY91 577 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 HIST1H2AAQ96QV6 131 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 TMEM246Q9BRR3 403 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 LHX3Q9UBR4 397 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 MYH14Q7Z406 1995 aaKnown RBP13.09□□□□□ -0.31
SPAST-201ENST00000315285 OR5K4A6NMS3 321 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 AOAHP28039 575 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 HTR3DQ70Z44 454 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 SHFQ7M4L6 423 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 SLC39A11Q8N1S5 342 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 ASB11Q8WXH4 323 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 RBP7Q96R05 134 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 PCDHA9Q9Y5H5 950 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 NOTOA8MTQ0 251 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 ITGAMP11215 1152 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 NR2C1P13056 603 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 RNH1P13489 461 aaKnown RBP13.09□□□□□ -0.31
SPAST-201ENST00000315285 DDCP20711 480 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 SLC5A2P31639 672 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 CSNK1DP48730 415 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 CTSCP53634 463 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 EMX1Q04741 257 aaPredicted RBP13.09□□□□□ -0.31
SPAST-201ENST00000315285 POU4F2Q12837 409 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 RUNX3Q13761 415 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 ABCA11PQ4W5N1 156 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 SLC25A25Q6KCM7 469 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 ARHGAP11AQ6P4F7 1023 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 RPLP0P6Q8NHW5 317 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 THAP6Q8TBB0 222 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 SCGB3A2Q96PL1 93 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 CLSTN3Q9BQT9 956 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 FZD3Q9NPG1 666 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 GMPR2Q9P2T1 348 aaKnown RBP13.09□□□□□ -0.31
SPAST-201ENST00000315285 SERTAD3Q9UJW9 196 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 PCDHGB2Q9Y5G2 931 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 LOC100509620A0A075B734 347 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 SOX30O94993 753 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 ATE1O95260 518 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 C5AR1P21730 350 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 GRIN2CQ14957 1233 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 TCEAL6Q6IPX3 200 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 ITFG2Q969R8 447 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 SGTBQ96EQ0 304 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 TRMT2BQ96GJ1 504 aaKnown RBP13.09□□□□□ -0.31
SPAST-201ENST00000315285 CCDC115Q96NT0 180 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 ORAI3Q9BRQ5 295 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 ZBTB20Q9HC78 741 aaPredicted RBP13.09□□□□□ -0.31
SPAST-201ENST00000315285 IL23AQ9NPF7 189 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 RDH8Q9NYR8 311 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 ABCG2Q9UNQ0 655 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 TRBV2A0A0J9YWF9 115 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 A0A1B0GVG6 124 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 C11orf98E9PRG8 122 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 ADAM12O43184 909 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 PLAG1Q6DJT9 500 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 PLBD1Q6P4A8 553 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 GDPGP1Q6ZNW5 385 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 CBLL1Q75N03 491 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 DPPA4Q7L190 304 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 STX12Q86Y82 276 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 ACOT12Q8WYK0 555 aa13.09□□□□□ -0.31
SPAST-201ENST00000315285 ITPKCQ96DU7 683 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms