RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 GRIN2CQ14957 1233 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 ZNF776Q68DI1 518 aaPredicted RBP13.06□□□□□ -0.32
CLCN6-201ENST00000312413 TRIM46Q7Z4K8 759 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 RASGRP3Q8IV61 690 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 OR52B6Q8NGF0 335 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 HMGB4Q8WW32 186 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 KLHL21Q9UJP4 597 aa13.06□□□□□ -0.32
CLCN6-201ENST00000312413 UBFD1O14562 309 aaKnown RBP13.05□□□□□ -0.32
CLCN6-201ENST00000312413 PHYHO14832 338 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 TSPAN6O43657 245 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 MAFKO60675 156 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 NUDT7P0C024 238 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 ETFAP13804 333 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 ENDOUP21128 410 aaKnown RBP13.05□□□□□ -0.32
CLCN6-201ENST00000312413 ACRV1P26436 265 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 DCTP40126 519 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 RPS26P62854 115 aaKnown RBP13.05□□□□□ -0.32
CLCN6-201ENST00000312413 ERVK-25P63136 954 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 DOC2AQ14183 400 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 PPA1Q15181 289 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 SGCAQ16586 387 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 HMGN2P46Q86SG4 172 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 PGAM5Q96HS1 289 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 C19orf25Q9UFG5 118 aaPredicted RBP13.05□□□□□ -0.32
CLCN6-201ENST00000312413 INTS6Q9UL03 887 aaKnown RBP13.05□□□□□ -0.32
CLCN6-201ENST00000312413 ENPP4Q9Y6X5 453 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 NAP1L6A6NFF2 107 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 FAM72CH0Y354 149 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 ZBTB48P10074 688 aaPredicted RBP13.05□□□□□ -0.32
CLCN6-201ENST00000312413 MAGEA6P43360 314 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 WNT4P56705 351 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 SH3BP2P78314 561 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 SF3A2Q15428 464 aaKnown RBP13.05□□□□□ -0.32
CLCN6-201ENST00000312413 FAM72AQ5TYM5 149 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 FAM72DQ6L9T8 149 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 FAM72BQ86X60 149 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 C3orf58Q8NDZ4 430 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 PRTFDC1Q9NRG1 225 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 CD300AQ9UGN4 299 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 DKKL1Q9UK85 242 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 ICKQ9UPZ9 632 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 ZNF860A6NHJ4 632 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 SULT1C2O00338 296 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 CDK4P11802 303 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 TYRP14679 529 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 HRH2P25021 359 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 ZNF84P51523 738 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 NKX6-1P78426 367 aaPredicted RBP13.05□□□□□ -0.32
CLCN6-201ENST00000312413 SLAMF1Q13291 335 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 APOFQ13790 326 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 PLBD1Q6P4A8 553 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 SLC9B2Q86UD5 537 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 UMODL1-AS1Q8N2C9 162 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 BEST4Q8NFU0 473 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 L3HYPDHQ96EM0 354 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 SLC29A1Q99808 456 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 TMEM175Q9BSA9 504 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 LRFN1Q9P244 771 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 ZNF175Q9Y473 711 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 TRAV18A0A075B6X5 111 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 PRSS3P35030 304 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 KEAP1Q14145 624 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 OR52N2Q8NGI0 321 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 OR52E2Q8NGJ4 325 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 GLYATL2Q8WU03 294 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 HOXB13Q92826 284 aaPredicted RBP13.05□□□□□ -0.32
CLCN6-201ENST00000312413 APMAPQ9HDC9 416 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 CACNG2Q9Y698 323 aa13.05□□□□□ -0.32
CLCN6-201ENST00000312413 AK1P00568 194 aa13.04□□□□□ -0.32
CLCN6-201ENST00000312413 HAPLN1P10915 354 aaPredicted RBP13.04□□□□□ -0.32
CLCN6-201ENST00000312413 MSR1P21757 451 aa13.04□□□□□ -0.32
CLCN6-201ENST00000312413 HNF1BP35680 557 aa13.04□□□□□ -0.32
CLCN6-201ENST00000312413 KCNJ5P48544 419 aa13.04□□□□□ -0.32
CLCN6-201ENST00000312413 LRP8Q14114 963 aa13.04□□□□□ -0.32
CLCN6-201ENST00000312413 WDR45BQ5MNZ6 344 aa13.04□□□□□ -0.32
CLCN6-201ENST00000312413 CHADLQ6NUI6 762 aa13.04□□□□□ -0.32
CLCN6-201ENST00000312413 CELF5Q8N6W0 485 aaKnown RBP13.04□□□□□ -0.32
CLCN6-201ENST00000312413 ZNF611Q8N823 705 aa13.04□□□□□ -0.32
CLCN6-201ENST00000312413 OR56B2PQ8NGI1 322 aa13.04□□□□□ -0.32
CLCN6-201ENST00000312413 PTERQ96BW5 349 aa13.04□□□□□ -0.32
CLCN6-201ENST00000312413 SYT3Q9BQG1 590 aa13.04□□□□□ -0.32
CLCN6-201ENST00000312413 RBCK1Q9BYM8 510 aa13.04□□□□□ -0.32
CLCN6-201ENST00000312413 ZBTB20Q9HC78 741 aaPredicted RBP13.04□□□□□ -0.32
CLCN6-201ENST00000312413 FANCFQ9NPI8 374 aa13.04□□□□□ -0.32
CLCN6-201ENST00000312413 TDP1Q9NUW8 608 aa13.04□□□□□ -0.32
CLCN6-201ENST00000312413 MARCH4Q9P2E8 410 aaPredicted RBP13.04□□□□□ -0.32
CLCN6-201ENST00000312413 A0A0G2JLL6 359 aaPredicted RBP13.04□□□□□ -0.32
CLCN6-201ENST00000312413 CPED1A4D0V7 1026 aa13.04□□□□□ -0.32
CLCN6-201ENST00000312413 OR6C6A6NF89 314 aa13.04□□□□□ -0.32
CLCN6-201ENST00000312413 DRD2P14416 443 aa13.04□□□□□ -0.32
CLCN6-201ENST00000312413 IFNGR1P15260 489 aa13.04□□□□□ -0.32
CLCN6-201ENST00000312413 GKP32189 559 aa13.04□□□□□ -0.32
CLCN6-201ENST00000312413 PGGT1BP53609 377 aa13.04□□□□□ -0.32
CLCN6-201ENST00000312413 OR4D1Q15615 310 aa13.04□□□□□ -0.32
CLCN6-201ENST00000312413 TMEM107Q6UX40 140 aa13.04□□□□□ -0.32
CLCN6-201ENST00000312413 KCTD20Q7Z5Y7 419 aa13.04□□□□□ -0.32
CLCN6-201ENST00000312413 PRRT2Q7Z6L0 340 aaPredicted RBP13.04□□□□□ -0.32
CLCN6-201ENST00000312413 ASPGQ86U10 573 aa13.04□□□□□ -0.32
CLCN6-201ENST00000312413 TMEM173Q86WV6 379 aaPredicted RBP13.04□□□□□ -0.32
CLCN6-201ENST00000312413 LRRC25Q8N386 305 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms