RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 C2orf92A0A1B0GVN3 265 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 MYO1GB0I1T2 1018 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 TMEM114B3SHH9 223 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 PDE9AO76083 593 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 RASAL1O95294 804 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 CELA3AP09093 270 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 ALDOCP09972 364 aaKnown RBP11.11□□□□□ -0.63
SCFD1-201ENST00000311943 DRD2P14416 443 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 MAP4K2Q12851 820 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 SLC9B1Q4ZJI4 515 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 FHL5Q5TD97 284 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 ZNF324BQ6AW86 544 aaPredicted RBP11.11□□□□□ -0.63
SCFD1-201ENST00000311943 NPSR1Q6W5P4 371 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 CNPY4Q8N129 248 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 ZNF441Q8N8Z8 693 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 ASB15Q8WXK1 588 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 FRMD6Q96NE9 622 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 AMDHD1Q96NU7 426 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 RNF32Q9H0A6 362 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 YARS2Q9Y2Z4 477 aaKnown RBP11.11□□□□□ -0.63
SCFD1-201ENST00000311943 NINQ8N4C6 2090 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 NUP214P35658 2090 aaPredicted RBP11.11□□□□□ -0.63
SCFD1-201ENST00000311943 BLACEA4D250 179 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 A8MVJ9 347 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 UPK1AO00322 258 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 SDHDO14521 159 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 ZNF195O14628 629 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 HS6ST1O60243 411 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 GUCY1B2O75343 617 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 TRHRP34981 398 aaPredicted RBP11.11□□□□□ -0.63
SCFD1-201ENST00000311943 TDGF1P3P51864 188 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 NAA20P61599 178 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 CEBPEQ15744 281 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 ZNF791Q3KP31 576 aaPredicted RBP11.11□□□□□ -0.63
SCFD1-201ENST00000311943 ATP6AP1LQ52LC2 224 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 PIGGQ5H8A4 983 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 PSD4Q8NDX1 1056 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 OR52N2Q8NGI0 321 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 HPF1Q9NWY4 346 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 NKIRAS1Q9NYS0 192 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 FLRT3Q9NZU0 649 aa11.11□□□□□ -0.63
SCFD1-201ENST00000311943 USP9XQ93008 2570 aaPredicted RBP11.1□□□□□ -0.63
SCFD1-201ENST00000311943 FAM166BA8MTA8 275 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 B4DXG7 233 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 NPIPA5E9PKD4 350 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 H3BQF6 201 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 FCHO1O14526 889 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 NME2P1O60361 137 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 RFPL3SP0C7P2 107 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 NME2P22392 152 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 SERPINB5P36952 375 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 MEOX1P50221 254 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 CASP9P55211 416 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 PHC1P78364 1004 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 FAM47EQ6ZV65 393 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 CROCCP2Q86T23 111 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 FAM13CQ8NE31 585 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 OR52B2Q96RD2 323 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 BBS4Q96RK4 519 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 CCT7Q99832 543 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 YIPF4Q9BSR8 244 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 REEP4Q9H6H4 257 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 TRIM45Q9H8W5 580 aaPredicted RBP11.1□□□□□ -0.63
SCFD1-201ENST00000311943 EQTNQ9NQ60 294 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 OLAHQ9NV23 265 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 SH3BGRL2Q9UJC5 107 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 HAO1Q9UJM8 370 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 NPIPA1Q9UND3 350 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 ESPL1Q14674 2120 aa11.1□□□□□ -0.63
SCFD1-201ENST00000311943 PEX1O43933 1283 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 VPS4BO75351 444 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 CT45A8P0DMV1 189 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 CT45A9P0DMV2 189 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 GRK2P25098 689 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 PRKAG1P54619 331 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 CT45A2Q5DJT8 189 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 C3P1Q6ZMU1 363 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 RNF165Q6ZSG1 346 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 LARP4Q71RC2 724 aaKnown RBP eCLIP11.09□□□□□ -0.63
SCFD1-201ENST00000311943 SLC29A4Q7RTT9 530 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 FGD2Q7Z6J4 655 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 CLECL1Q8IZS7 167 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 NUBPLQ8TB37 319 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 C16orf58Q96GQ5 468 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 SLX1AQ9BQ83 275 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 EBF4Q9BQW3 602 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 RTN4RQ9BZR6 473 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 STMN4Q9H169 189 aaPredicted RBP11.09□□□□□ -0.63
SCFD1-201ENST00000311943 ARGLU1Q9NWB6 273 aaPredicted RBP11.09□□□□□ -0.63
SCFD1-201ENST00000311943 ABI3Q9P2A4 366 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 VPS4AQ9UN37 437 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 ENTPD4Q9Y227 616 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 CHCHD2Q9Y6H1 151 aaPredicted RBP11.09□□□□□ -0.63
SCFD1-201ENST00000311943 MED12Q93074 2177 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 UNC5CO95185 931 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 ABCB1P08183 1280 aaPredicted RBP11.09□□□□□ -0.63
SCFD1-201ENST00000311943 CD46P15529 392 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 ABCD3P28288 659 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 IL12AP29459 219 aa11.09□□□□□ -0.63
SCFD1-201ENST00000311943 RNF144AP50876 292 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms