RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 NUP43Q8NFH3 380 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 OR56A1Q8NGH5 318 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 PPWD1Q96BP3 646 aaKnown RBP6.52□□□□□ -1.37
PTCD2-201ENST00000308077 C16orf58Q96GQ5 468 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 POM121Q96HA1 1249 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 ZNF570Q96NI8 536 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 OR6C1Q96RD1 312 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 YIPF4Q9BSR8 244 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 NDC1Q9BTX1 674 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 EDEM2Q9BV94 578 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 OR51I1Q9H343 314 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 CLK4Q9HAZ1 481 aaKnown RBP6.52□□□□□ -1.37
PTCD2-201ENST00000308077 FANCEQ9HB96 536 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 LANCL2Q9NS86 450 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 OCIAD1Q9NX40 245 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 MAT2BQ9NZL9 334 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 C6orf203Q9P0P8 240 aaPredicted RBP6.52□□□□□ -1.37
PTCD2-201ENST00000308077 NTMQ9P121 344 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 FTSJ1Q9UET6 329 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 NDOR1Q9UHB4 597 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 C15orf41Q9Y2V0 281 aa6.52□□□□□ -1.37
PTCD2-201ENST00000308077 A0A1B0GX78 115 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 PLOD2O00469 737 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 CBFA2T3O75081 653 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 PRKD3O94806 890 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 BCHEP06276 602 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 GP1BAP07359 652 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 MAOAP21397 527 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 MATN1P21941 496 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 VHLP40337 213 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 MAN2A2P49641 1150 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 PRIM2P49643 509 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 EFNA3P52797 238 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 PCBP3P57721 371 aaKnown RBP6.51□□□□□ -1.37
PTCD2-201ENST00000308077 IGLV3-21P80748 117 aaPredicted RBP6.51□□□□□ -1.37
PTCD2-201ENST00000308077 CDK6Q00534 326 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 ACY1Q03154 408 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 ZFP36L1Q07352 338 aaKnown RBP6.51□□□□□ -1.37
PTCD2-201ENST00000308077 RBBP4Q09028 425 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 FUT5Q11128 374 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 MYBPC3Q14896 1274 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 TRIP10Q15642 601 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 CLPPQ16740 277 aaPredicted RBP6.51□□□□□ -1.37
PTCD2-201ENST00000308077 ZNF630Q2M218 657 aaPredicted RBP6.51□□□□□ -1.37
PTCD2-201ENST00000308077 PRICKLE4Q2TBC4 344 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 TRMT12Q53H54 448 aaKnown RBP6.51□□□□□ -1.37
PTCD2-201ENST00000308077 RPS26P11Q5JNZ5 115 aaPredicted RBP6.51□□□□□ -1.37
PTCD2-201ENST00000308077 COLEC12Q5KU26 742 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 OGFRL1Q5TC84 451 aaPredicted RBP6.51□□□□□ -1.37
PTCD2-201ENST00000308077 C1orf189Q5VU69 101 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 CBLL1Q75N03 491 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 ZC3H7AQ8IWR0 971 aaKnown RBP6.51□□□□□ -1.37
PTCD2-201ENST00000308077 ZNF595Q8IYB9 648 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 OR2L13Q8N349 312 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 SLC38A9Q8NBW4 561 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 MIPOL1Q8TD10 442 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 ADAMTS18Q8TE60 1221 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 MOAP1Q96BY2 351 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 MVB12AQ96EY5 273 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 SLC47A1Q96FL8 570 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 TMEM19Q96HH6 336 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 RNF145Q96MT1 663 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 SEMA6AQ9H2E6 1030 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 APMAPQ9HDC9 416 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 PARD6AQ9NPB6 346 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 A4GALTQ9NPC4 353 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 EQTNQ9NQ60 294 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 NECTIN3Q9NQS3 549 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 PRTFDC1Q9NRG1 225 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 AGPAT4Q9NRZ5 378 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 KCNE3Q9Y6H6 103 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 SPG11Q96JI7 2443 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 FRYQ5TBA9 3013 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 IGF2RP11717 2491 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 BLACEA4D250 179 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 FAM149AA5PLN7 773 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 HNRNPRO43390 633 aaKnown RBP6.51□□□□□ -1.37
PTCD2-201ENST00000308077 CTNSO60931 367 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 WISP1O95388 367 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 ZNF682O95780 498 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 OPN1SWP03999 348 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 SEMG1P04279 462 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 CAPNS1P04632 268 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 TFPTP0C1Z6 253 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 SLC35E2P0CK97 266 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 RAP2AP10114 183 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 NT5EP21589 574 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 IL10P22301 178 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 PPP2R1BP30154 601 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 KHKP50053 298 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 ARSFP54793 590 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 PRR5P85299 388 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 SLC13A2Q13183 592 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 DUSP8Q13202 625 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 DSG2Q14126 1118 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 MAP7Q14244 749 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 SYPL1Q16563 259 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 LRRC36Q1X8D7 754 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 COL28A1Q2UY09 1125 aa6.51□□□□□ -1.37
PTCD2-201ENST00000308077 YOD1Q5VVQ6 348 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms