RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 OR9A4Q8NGU2 314 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 KLHL21Q9UJP4 597 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 BAZ2BQ9UIF8 2168 aaKnown RBP9.93□□□□□ -0.82
CLIP1-201ENST00000302528 LOC102723532A0A0G2JNH3 316 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 A0A1W2PPV4 95 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 DLX3O60479 287 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 ASGR2P07307 311 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 CREB1P16220 341 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 RPS15P62841 145 aaKnown RBP9.93□□□□□ -0.82
CLIP1-201ENST00000302528 FBXL22Q6P050 247 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 DRICH1Q6PGQ1 229 aaPredicted RBP9.93□□□□□ -0.82
CLIP1-201ENST00000302528 GPR155Q7Z3F1 870 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 RDH10Q8IZV5 341 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 CLDN19Q8N6F1 224 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 OR5L2Q8NGL0 311 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 MITD1Q8WV92 249 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 OR5P2Q8WZ92 322 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 CNOT9Q92600 299 aaKnown RBP9.93□□□□□ -0.82
CLIP1-201ENST00000302528 CACNG6Q9BXT2 260 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 CD244Q9BZW8 370 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 RNF225M0QZC1 329 aaPredicted RBP9.93□□□□□ -0.82
CLIP1-201ENST00000302528 AGPAT2O15120 278 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 NPPAP01160 153 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 RBMS1P29558 406 aaKnown RBP9.93□□□□□ -0.82
CLIP1-201ENST00000302528 PBX2P40425 430 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 SOX3P41225 446 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 KCNC3Q14003 757 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 PTPRRQ15256 657 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 OR9I1Q8NGQ6 314 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 CNIH3Q8TBE1 160 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 RNF128Q8TEB7 428 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 NTAN1Q96AB6 310 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 DERL2Q9GZP9 239 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 ZNF395Q9H8N7 513 aaPredicted RBP9.93□□□□□ -0.82
CLIP1-201ENST00000302528 SULT1C2O00338 296 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 F7P08709 466 aaPredicted RBP9.92□□□□□ -0.82
CLIP1-201ENST00000302528 ARL2P36404 184 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 PTGIRP43119 386 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 NR4A2P43354 598 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 ARL16Q0P5N6 197 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 NCCRP1Q6ZVX7 275 aaPredicted RBP9.92□□□□□ -0.82
CLIP1-201ENST00000302528 LRP10Q7Z4F1 713 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 PIGWQ7Z7B1 504 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 SGPP2Q8IWX5 399 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 BMFQ96LC9 184 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 LMF1Q96S06 567 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 NELL2Q99435 816 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 PIP5K1AQ99755 562 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 PREBQ9HCU5 417 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 CNOT11Q9UKZ1 510 aaKnown RBP9.92□□□□□ -0.82
CLIP1-201ENST00000302528 WNT6Q9Y6F9 365 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 ATRNO75882 1429 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 MYOCOSA0A1B0GUC4 107 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 ANKRD66B4E2M5 251 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 D6RAR5 112 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 SOX30O94993 753 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 S100A7P31151 101 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 HOXA9P31269 272 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 FOXN2P32314 431 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 ARSFP54793 590 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 LIPJQ5W064 366 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 TXNDC8Q6A555 127 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 TERB2Q8NHR7 220 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 C16orf78Q8WTQ4 265 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 TSPEARQ8WU66 669 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 DDX1Q92499 740 aaKnown RBP9.92□□□□□ -0.82
CLIP1-201ENST00000302528 TWNKQ96RR1 684 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 NME7Q9Y5B8 376 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 EFCAB7A8K855 629 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 SPDEFO95238 335 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 CDK1P06493 297 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 SPATS1Q496A3 300 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 OR52W1Q6IF63 320 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 NIPAL3Q6P499 406 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 TPRA1Q86W33 373 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 OR4K15Q8NH41 348 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 HAS2Q92819 552 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 SCLYQ96I15 445 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 COG8Q96MW5 612 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 RDH12Q96NR8 316 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 BCO2Q9BYV7 579 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 NSUN3Q9H649 340 aaKnown RBP9.92□□□□□ -0.82
CLIP1-201ENST00000302528 EMC8O43402 210 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 OIP5O43482 229 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 TMEM63AO94886 807 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 RETP07949 1114 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 ZNF43P17038 809 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 CLCN2P51788 898 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 TIGD5Q53EQ6 642 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 EEF1A1P5Q5VTE0 462 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 TLDC1Q6P9B6 456 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 SKA3Q8IX90 412 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 OR14L1PQ8NHC6 308 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 ZNF420Q8TAQ5 688 aaPredicted RBP9.92□□□□□ -0.82
CLIP1-201ENST00000302528 KLHL9Q9P2J3 617 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 B3GNT3Q9Y2A9 372 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 MTMR11A4FU01 709 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 NRP1O14786 923 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 CRTAPO75718 401 aaPredicted RBP9.92□□□□□ -0.82
CLIP1-201ENST00000302528 SERPINA5P05154 406 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms