RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 SSX4O60224 188 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 CLIC3O95833 236 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 AKAIN1P0CW23 69 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 TAS2R20P59543 309 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 MFSD13AQ14CX5 517 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 EOGTQ5NDL2 527 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 ARHGAP40Q5TG30 622 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 SERINC5Q86VE9 423 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 GPR150Q8NGU9 434 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 TFAP2CQ92754 450 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 GLYATL1Q969I3 302 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 SGTBQ96EQ0 304 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 MYADMQ96S97 322 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 APMAPQ9HDC9 416 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 B4GALT7Q9UBV7 327 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 ZFR2Q9UPR6 939 aaKnown RBP7.29□□□□□ -1.24
SF3B3-201ENST00000302516 NPC1O15118 1278 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 VILLO15195 856 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 HCRTR2O43614 444 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 TSPAN6O43657 245 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 DIRAS1O95057 198 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 ATE1O95260 518 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 C1GALT1C1LP0DN25 315 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 OR1E2P47887 323 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 ARHGAP1Q07960 439 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 BTF3L4Q96K17 158 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 BIN3Q9NQY0 253 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 KCNS2Q9ULS6 477 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 RNF215Q9Y6U7 377 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 OR5K4A6NMS3 321 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 SLC16A8O95907 504 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 AK4P27144 223 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-201ENST00000302516 KDELR2P33947 212 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 GGT2P36268 569 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 DIO3P55073 304 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 SELENOVP59797 346 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 MELKQ14680 651 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 PON2Q15165 354 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 AKR1C8PQ5T2L2 129 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 CHADLQ6NUI6 762 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.29□□□□□ -1.242e-38■■□□□ 13.7
SF3B3-201ENST00000302516 NUP43Q8NFH3 380 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 OR2T4Q8NH00 348 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 MS4A4EQ96PG1 132 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 NAA11Q9BSU3 229 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-201ENST00000302516 OR51J1Q9H342 316 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 SERTAD3Q9UJW9 196 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 INTS6Q9UL03 887 aaKnown RBP7.29□□□□□ -1.24
SF3B3-201ENST00000302516 LOC285095A0A1B0GVY8 99 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 TSPAN15O95858 294 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 ZNF35P13682 527 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 ATXN7L3Q14CW9 347 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-201ENST00000302516 ZNF529Q6P280 563 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 TLDC1Q6P9B6 456 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 NAPRTQ6XQN6 538 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 COMTD1Q86VU5 262 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 OR52N2Q8NGI0 321 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 OR52P1PQ8NH57 321 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 SORCS1Q8WY21 1168 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 ZDHHC12Q96GR4 267 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 PINK1Q9BXM7 581 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 DNTTIP1Q9H147 329 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 WRAP73Q9P2S5 460 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-201ENST00000302516 CLEC4EQ9ULY5 219 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 TBPL1P62380 186 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 NKX3-2P78367 333 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 PLP2Q04941 152 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 RAB31Q13636 194 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 VEZF1Q14119 521 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 CNIH2Q6PI25 160 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 P4HA3Q7Z4N8 544 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 ZDHHC1Q8WTX9 485 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 OR2M2Q96R28 347 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 DNAJC5Q9H3Z4 198 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 GLTPQ9NZD2 209 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 BTNL2Q9UIR0 455 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 S1PR4O95977 384 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 ZNF8P17098 575 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-201ENST00000302516 GNRHRP30968 328 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 BMXP51813 675 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 RPS21P63220 83 aaKnown RBP7.29□□□□□ -1.24
SF3B3-201ENST00000302516 ZNF792Q3KQV3 632 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 MMAAQ8IVH4 418 aaKnown RBP7.29□□□□□ -1.24
SF3B3-201ENST00000302516 GALNT11Q8NCW6 608 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 CIDECQ96AQ7 238 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-201ENST00000302516 C17orf62Q9BQA9 187 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 OR51B5Q9H339 312 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 GORASP2Q9H8Y8 452 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 HIF3AQ9Y2N7 669 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 KRBA1A5PL33 1030 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 FGF4P08620 206 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 MRPL3P09001 348 aaKnown RBP7.29□□□□□ -1.24
SF3B3-201ENST00000302516 DHRS4L1P0CG22 281 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 CA5AP35218 305 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 ACVRL1P37023 503 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 RNASE10Q5GAN6 216 aaKnown RBP7.29□□□□□ -1.24
SF3B3-201ENST00000302516 ZNF283Q8N7M2 679 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 OR5AK2Q8NH90 309 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 NDNFQ8TB73 568 aa7.29□□□□□ -1.24
SF3B3-201ENST00000302516 TRMT10AQ8TBZ6 339 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms