RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 FRMD6Q96NE9 622 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 CWH43Q9H720 699 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 CMAHPQ9Y471 501 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 STK25O00506 426 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 PPM1DO15297 605 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 RASGRP1O95267 797 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 IFNA16P05015 189 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 CYP17A1P05093 508 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 ALPPP05187 535 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 SMSP52788 366 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 FADDQ13158 208 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 KIAA0040Q15053 153 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 ZNF181Q2M3W8 571 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 ARMC6Q6NXE6 501 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 GALNT13Q8IUC8 556 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 LRRC17Q8N6Y2 441 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 DENND6BQ8NEG7 585 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 OR6K6Q8NGW6 343 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 GRPEL2Q8TAA5 225 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 NEIL3Q8TAT5 605 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 RASSF5Q8WWW0 418 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 NELL2Q99435 816 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 WDR26Q9H7D7 661 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 CXorf36Q9H7Y0 433 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 TMEM184CQ9NVA4 438 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 COQ3Q9NZJ6 369 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 SLC6A14Q9UN76 642 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 OR10H1Q9Y4A9 318 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 HSPE1-MOB4S4R3N1 261 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 OR2A25A4D2G3 310 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 ALX3O95076 343 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 CBLP22681 906 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 ACVR1BP36896 505 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 CSRP3P50461 194 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 RACK1P63244 317 aaKnown RBP13.32□□□□□ -0.28
SDC2-201ENST00000302190 ZNF367Q7RTV3 350 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 OOSP2Q86WS3 158 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 Q8N402 240 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 BBS10Q8TAM1 723 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 DYNC2LI1Q8TCX1 351 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 SLC38A5Q8WUX1 472 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 SAMD11Q96NU1 681 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 EGLN3Q9H6Z9 239 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 PHPT1Q9NRX4 125 aaPredicted RBP13.32□□□□□ -0.28
SDC2-201ENST00000302190 QPCTLQ9NXS2 382 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 NDRG4Q9ULP0 352 aaKnown RBP13.32□□□□□ -0.28
SDC2-201ENST00000302190 SPAG17Q6Q759 2223 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 HIDE1A8MVS5 230 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 PLD2O14939 933 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 FZD6O60353 706 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 NOS1APO75052 506 aaPredicted RBP13.31□□□□□ -0.28
SDC2-201ENST00000302190 CSNK2A2P19784 350 aaPredicted RBP13.31□□□□□ -0.28
SDC2-201ENST00000302190 TLX1P31314 330 aaPredicted RBP13.31□□□□□ -0.28
SDC2-201ENST00000302190 FBXW4P57775 412 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 RAB14P61106 215 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 SUZ12Q15022 739 aaKnown RBP13.31□□□□□ -0.28
SDC2-201ENST00000302190 NDUFAF5Q5TEU4 345 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 PAMR1Q6UXH9 720 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 CDH24Q86UP0 819 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 TCEAL8Q8IYN2 117 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 L3MBTL4Q8NA19 623 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 CYB561A3Q8NBI2 242 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 GALNT6Q8NCL4 622 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 NEDD4LQ96PU5 975 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 BHLHE41Q9C0J9 482 aaPredicted RBP13.31□□□□□ -0.28
SDC2-201ENST00000302190 KRCC1Q9NPI7 259 aaPredicted RBP13.31□□□□□ -0.28
SDC2-201ENST00000302190 SEC14L4Q9UDX3 406 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 LOC105371267A0A1B0GV96 52 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 YY2O15391 372 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 CXCL10P02778 98 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 ACADMP11310 421 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 P2RX3P56373 397 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 TAP2Q03519 686 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 DEFB134Q4QY38 66 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 LRIF1Q5T3J3 769 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 DCUN1D3Q8IWE4 304 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 SLC30A8Q8IWU4 369 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 ZNF557Q8N988 423 aaPredicted RBP13.31□□□□□ -0.28
SDC2-201ENST00000302190 SYT14Q8NB59 555 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 OR8J2Q8NGG1 315 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 ZNF689Q96CS4 500 aaPredicted RBP13.31□□□□□ -0.28
SDC2-201ENST00000302190 OR4K3Q96R72 315 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 EPYCQ99645 322 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 MCHR1Q99705 422 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 DPH7Q9BTV6 452 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 TNFRSF10DQ9UBN6 386 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 NDOR1Q9UHB4 597 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 IQCMA0A1B0GVH7 501 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 HOXC11O43248 304 aaPredicted RBP13.31□□□□□ -0.28
SDC2-201ENST00000302190 PRAMEF4O60810 478 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 ZNF821O75541 412 aaPredicted RBP13.31□□□□□ -0.28
SDC2-201ENST00000302190 WBP4O75554 376 aaKnown RBP13.31□□□□□ -0.28
SDC2-201ENST00000302190 CDC123O75794 336 aaPredicted RBP13.31□□□□□ -0.28
SDC2-201ENST00000302190 SEMA3DO95025 777 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 C1orf105O95561 183 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 MSL3P1P0C860 447 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 EPCAMP16422 314 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 ACTR1BP42025 376 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 CXCR4P61073 352 aa13.31□□□□□ -0.28
SDC2-201ENST00000302190 ACTR1AP61163 376 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms