RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 MC1RQ01726 317 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.66□□□□□ -0.22
CDT1-201ENST00000301019 PUM1Q14671 1186 aaKnown RBP eCLIP13.66□□□□□ -0.22
CDT1-201ENST00000301019 NOXRED1Q6NXP6 359 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 TMEM107Q6UX40 140 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 ADGRG2Q8IZP9 1017 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 TMEM40Q8WWA1 233 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 SLC38A3Q99624 504 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 GSDMCQ9BYG8 508 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 ZNF436Q9C0F3 470 aaPredicted RBP13.66□□□□□ -0.22
CDT1-201ENST00000301019 POLR2J3Q9H1A7 115 aaKnown RBP13.66□□□□□ -0.22
CDT1-201ENST00000301019 DPAGT1Q9H3H5 408 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 CXXC1Q9P0U4 656 aaPredicted RBP13.66□□□□□ -0.22
CDT1-201ENST00000301019 SLC22A14Q9Y267 594 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 PCDHGB7Q9Y5F8 929 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 A0A1W2PQH9 124 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 LGALS2P05162 132 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 GPR15P49685 360 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 PDSS1Q5T2R2 415 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 LRIF1Q5T3J3 769 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 GCNT6Q5T4J0 391 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 BHLHA9Q7RTU4 235 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 TMPRSS11BQ86T26 416 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 SERPINA11Q86U17 422 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 SERPINA12Q8IW75 414 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 LAS2Q8IYD9 372 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 PGBD3Q8N328 593 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 POLR1EQ9GZS1 481 aaKnown RBP13.66□□□□□ -0.22
CDT1-201ENST00000301019 ZDHHC4Q9NPG8 344 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 NARSO43776 548 aaKnown RBP13.66□□□□□ -0.22
CDT1-201ENST00000301019 RAMP2O60895 175 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 TRIM3O75382 744 aaPredicted RBP13.66□□□□□ -0.22
CDT1-201ENST00000301019 LDOC1O95751 146 aaPredicted RBP13.66□□□□□ -0.22
CDT1-201ENST00000301019 TLE2Q04725 743 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 PLA1AQ53H76 456 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 CYB5R2Q6BCY4 276 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 TNFAIP8L2Q6P589 184 aaPredicted RBP13.66□□□□□ -0.22
CDT1-201ENST00000301019 KLBQ86Z14 1044 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 PLPP6Q8IY26 295 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 CCDC36Q8IYA8 594 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 OR52B4Q8NGK2 314 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 ZFPM2Q8WW38 1151 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 FOXJ1Q92949 421 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 CIDECQ96AQ7 238 aaPredicted RBP13.66□□□□□ -0.22
CDT1-201ENST00000301019 WBP1Q96G27 269 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 SLC38A2Q96QD8 506 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 SARGQ9BW04 601 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 RASD1Q9Y272 281 aa13.66□□□□□ -0.22
CDT1-201ENST00000301019 RPH3AQ9Y2J0 694 aaPredicted RBP13.66□□□□□ -0.22
CDT1-201ENST00000301019 C2orf81A6NN90 581 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 H2AFB2P0C5Z0 115 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 RNF224P0DH78 156 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 EDNRBP24530 442 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 BTCP35070 178 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 RGNQ15493 299 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 CLDN22Q8N7P3 220 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 C11orf65Q8NCR3 313 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 RAB8BQ92930 207 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 GINS4Q9BRT9 223 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 RNF32Q9H0A6 362 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 AUNIPQ9H7T9 357 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 LYARQ9NX58 379 aaKnown RBP13.65□□□□□ -0.22
CDT1-201ENST00000301019 TAS2R3Q9NYW6 316 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 SLC22A7Q9Y694 548 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 LCTP09848 1927 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 POM121BA6NF01 834 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 CLDN9O95484 217 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 OR56A5P0C7T3 313 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 CSNK1DP48730 415 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 MLLT11Q13015 90 aaPredicted RBP13.65□□□□□ -0.22
CDT1-201ENST00000301019 PIN1Q13526 163 aaPredicted RBP13.65□□□□□ -0.22
CDT1-201ENST00000301019 CLINT1Q14677 625 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 ACSM5Q6NUN0 579 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 HUS1BQ8NHY5 278 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 ZDHHC1Q8WTX9 485 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 SLC25A28Q96A46 364 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 OSER1Q9NX31 292 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 STON1Q9Y6Q2 735 aa13.65□□□□□ -0.22
CDT1-201ENST00000301019 DNAJC25-GNG10A0A024R161 153 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.64□□□□□ -0.23
CDT1-201ENST00000301019 TXNL1O43396 289 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 STK16O75716 305 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 SYN1P17600 705 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 OGNP20774 298 aaKnown RBP13.64□□□□□ -0.23
CDT1-201ENST00000301019 ITGB7P26010 798 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 SHC1P29353 583 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 CTSCP53634 463 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 SCARB2Q14108 478 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 ZBTB6Q15916 424 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 HAGHLQ6PII5 290 aaPredicted RBP13.64□□□□□ -0.23
CDT1-201ENST00000301019 LRRN1Q6UXK5 716 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 ALPK2Q86TB3 2170 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 FAM181AQ8N9Y4 354 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 HJURPQ8NCD3 748 aaPredicted RBP13.64□□□□□ -0.23
CDT1-201ENST00000301019 DBF4BQ8NFT6 615 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 HAVCR2Q8TDQ0 301 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 C3orf49Q96BT1 292 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 DUSP26Q9BV47 211 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 MCOLN1Q9GZU1 580 aa13.64□□□□□ -0.23
CDT1-201ENST00000301019 RC3H2Q9HBD1 1191 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms