RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 FRS3O43559 492 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 TP53P04637 393 aaPredicted RBP12.17□□□□□ -0.46
HIF3A-204ENST00000300862 RPN2P04844 631 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 CHRM4P08173 479 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 HBQ1P09105 142 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 MMP11P24347 488 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 BCL6P41182 706 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 FRKP42685 505 aaPredicted RBP12.17□□□□□ -0.46
HIF3A-204ENST00000300862 NXNL2Q5VZ03 156 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 C19orf48Q6RUI8 117 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 IQCHQ86VS3 1027 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 TBC1D19Q8N5T2 526 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 OR2A1Q8NGT9 310 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 CREB3L4Q8TEY5 395 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 TMEM203Q969S6 136 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 BBS4Q96RK4 519 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 FNDC11Q9BVV2 318 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 ASPNQ9BXN1 380 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 DDX31Q9H8H2 851 aaKnown RBP12.17□□□□□ -0.46
HIF3A-204ENST00000300862 SYNPO2LQ9H987 977 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 CERS4Q9HA82 394 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 EQTNQ9NQ60 294 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 SLC35C2Q9NQQ7 365 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 ZNF221Q9UK13 617 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 FBXW2Q9UKT8 454 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 ATG4BQ9Y4P1 393 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 F5P12259 2224 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 A0A0A6YYD5 115 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 A0A1W2PP55 124 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 FAM172BPA6NC97 362 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 ERI3O43414 337 aaKnown RBP12.17□□□□□ -0.46
HIF3A-204ENST00000300862 MED26O95402 600 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 CSTF2P33240 577 aaKnown RBP eCLIP12.17□□□□□ -0.46
HIF3A-204ENST00000300862 SOX6P35712 828 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 SOX9P48436 509 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 SNRPGP62308 76 aaKnown RBP12.17□□□□□ -0.46
HIF3A-204ENST00000300862 MXD1Q05195 221 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 SLAMF1Q13291 335 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 FGL2Q14314 439 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 SPANXN2Q5MJ10 180 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 TMEM240Q5SV17 173 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 LIPKQ5VXJ0 399 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 C18orf63Q68DL7 685 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 C12orf73Q69YU5 71 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 ACSM5Q6NUN0 579 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 OR4K5Q8NGD3 323 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 SP7Q8TDD2 431 aaPredicted RBP12.17□□□□□ -0.46
HIF3A-204ENST00000300862 ZG16BQ96DA0 208 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 CHFRQ96EP1 664 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 TMEM80Q96HE8 168 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 HDAC8Q9BY41 377 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 BARHL1Q9BZE3 327 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 POLR2J2Q9GZM3 115 aaKnown RBP12.17□□□□□ -0.46
HIF3A-204ENST00000300862 FZD3Q9NPG1 666 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 SNTG1Q9NSN8 517 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 CARD8Q9Y2G2 431 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 LSM2Q9Y333 95 aaKnown RBP12.17□□□□□ -0.46
HIF3A-204ENST00000300862 PEX16Q9Y5Y5 336 aa12.17□□□□□ -0.46
HIF3A-204ENST00000300862 A0A1W2PR48 441 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 SMIM30A4D0T7 59 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 AP3D1O14617 1153 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 HMGN2P05204 90 aaKnown RBP12.16□□□□□ -0.46
HIF3A-204ENST00000300862 KRT8P05787 483 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 RAB8AP61006 207 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 PRDX1Q06830 199 aaKnown RBP12.16□□□□□ -0.46
HIF3A-204ENST00000300862 FUT5Q11128 374 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 KRT33BQ14525 404 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 IRF4Q15306 451 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 AGBL4Q5VU57 503 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 TANGO2Q6ICL3 276 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 TMEM107Q6UX40 140 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 DGLUCYQ7Z3D6 616 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 SMARCD2Q92925 531 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 CEP19Q96LK0 163 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 FUZQ9BT04 418 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 WDR26Q9H7D7 661 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 MAN2C1Q9NTJ4 1040 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 EHD3Q9NZN3 535 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 KIF26AQ9ULI4 1882 aaPredicted RBP12.16□□□□□ -0.46
HIF3A-204ENST00000300862 GRXCR1A8MXD5 290 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 SCO2O43819 266 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 TBX19O60806 448 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 SCG5P05408 212 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 PTNP21246 168 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 HTR3AP46098 478 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 OR2B6P58173 313 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 RACK1P63244 317 aaKnown RBP12.16□□□□□ -0.46
HIF3A-204ENST00000300862 HOXC5Q00444 222 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 MAP4K2Q12851 820 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 MADCAM1Q13477 382 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 GINS1Q14691 196 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 GPAT3Q53EU6 434 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 RTL10Q7L3V2 364 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 FBXL6Q8N531 539 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 OR8J1Q8NGP2 316 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 CNRIP1Q96F85 164 aaPredicted RBP12.16□□□□□ -0.46
HIF3A-204ENST00000300862 CAMK1GQ96NX5 476 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 TRNT1Q96Q11 434 aaKnown RBP12.16□□□□□ -0.46
HIF3A-204ENST00000300862 PLA2G12AQ9BZM1 189 aa12.16□□□□□ -0.46
HIF3A-204ENST00000300862 EGLN3Q9H6Z9 239 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms