RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 SACM1LQ9NTJ5 587 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 PCDHGB6Q9Y5F9 930 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 LMO7Q8WWI1 1683 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 PXNP49023 591 aaPredicted RBP12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 DLX2Q07687 328 aaPredicted RBP12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 BCL2L15Q5TBC7 163 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 KIF18BQ86Y91 864 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 C16orf78Q8WTQ4 265 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SYT4Q9H2B2 425 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 RGCCQ9H4X1 137 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 AIG1Q9NVV5 245 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ZNF840PA6NDX5 716 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 DUX1O43812 170 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 NR2C1P13056 603 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SFTPDP35247 375 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 DPP6P42658 865 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 RIDAP52758 137 aaKnown RBP12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 FXYD4P59646 89 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 AADACL4Q5VUY2 407 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 METTL2BQ6P1Q9 378 aaKnown RBP12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 TEX19Q8NA77 164 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 CNN2Q99439 309 aaKnown RBP12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 KLHL9Q9P2J3 617 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 GGT3PA6NGU5 568 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 FBXO45P0C2W1 286 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ADRB3P13945 408 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 CTBP2P56545 445 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ALG10BQ5I7T1 473 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 NDNFQ8TB73 568 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ADAMTS10Q9H324 1103 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 TCHHQ07283 1943 aa12.93□□□□□ -0.34
CHRFAM7A-201ENST00000299847 TGM5O43548 720 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ZNF14P17017 642 aaPredicted RBP12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 CERS1P27544 350 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 HTR6P50406 440 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 WNT7BP56706 349 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SELENOVP59797 346 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ZNF616Q08AN1 781 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 CEACAM7Q14002 265 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 NKPD1Q17RQ9 610 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 FAM214AQ32MH5 1076 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ZNF829Q3KNS6 432 aaPredicted RBP12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 C6orf132Q5T0Z8 1188 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 LRIF1Q5T3J3 769 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 MEDAGQ5VYS4 303 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 EIF5AL1Q6IS14 154 aaKnown RBP12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SPRYD4Q8WW59 207 aaPredicted RBP12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 KCNN1Q92952 543 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 C1orf226A1L170 272 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 H3BML4 177 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 TP53I11O14683 189 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SLC16A5O15375 505 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 GSRP00390 522 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 IFNGR1P15260 489 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 PORP16435 677 aaPredicted RBP12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 NSDHLQ15738 373 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 PLEKHG7Q6ZR37 379 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 TMEM19Q96HH6 336 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 DPH1Q9BZG8 443 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 CNIH4Q9P003 139 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SLC7A7Q9UM01 511 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 M0R3H8 397 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 GKN3PP0CG01 181 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 NPRL3Q12980 569 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SGCZQ96LD1 299 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 PAQR5Q9NXK6 330 aaPredicted RBP12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 FRS3O43559 492 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 CAPNS1P04632 268 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ZNF888P0CJ79 500 aaPredicted RBP12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 LAMP1P11279 417 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 MAP2K3P46734 347 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ERVPABLB-1P60509 514 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 MRPL49Q13405 166 aaKnown RBP12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 DUS1LQ6P1R4 473 aaKnown RBP12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 NRMQ8IXM6 262 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 OR5AR1Q8NGP9 310 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ZNF689Q96CS4 500 aaPredicted RBP12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 KCNK13Q9HB14 408 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SMOXQ9NWM0 555 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 STUB1Q9UNE7 303 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 FBP2O00757 339 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 GJB3O75712 270 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 RPL26P61254 145 aaKnown RBP12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 RPS15AP62244 130 aaKnown RBP12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 RSU1Q15404 277 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 CST6Q15828 149 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SLC16A9Q7RTY1 509 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 KLHDC8AQ8IYD2 350 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 LMO3Q8TAP4 145 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 TSPEARQ8WU66 669 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SLC41A3Q96GZ6 507 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SLC45A3Q96JT2 553 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 KLHL15Q96M94 604 aa12.92□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 GRXCR2A6NFK2 248 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 HMX3A6NHT5 357 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 DRD5P21918 477 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 FDXRP22570 491 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 HTR1EP28566 365 aa12.91□□□□□ -0.34
CHRFAM7A-201ENST00000299847 GPR143P51810 404 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms