RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 CHN2P52757 468 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 RAE1P78406 368 aaKnown RBP11.23□□□□□ -0.61
HMGB2-201ENST00000296503 FOXK1P85037 733 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 SPINK14Q6IE38 97 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 SLC48A1Q6P1K1 146 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 PGM2L1Q6PCE3 622 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 ATCAYQ86WG3 371 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 HOMEZQ8IX15 550 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 MMP21Q8N119 569 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 TMEM156Q8N614 296 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 HORMAD2Q8N7B1 307 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 RBM15BQ8NDT2 890 aaKnown RBP11.23□□□□□ -0.61
HMGB2-201ENST00000296503 CDC26Q8NHZ8 85 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 AGR3Q8TD06 166 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 C16orf78Q8WTQ4 265 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 CCDC106Q9BWC9 280 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 EBPLQ9BY08 206 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 ASF1BQ9NVP2 202 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 ZNF223Q9UK11 482 aaPredicted RBP11.23□□□□□ -0.61
HMGB2-201ENST00000296503 VPS4AQ9UN37 437 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 BIRC5O15392 142 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 RGS14O43566 566 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 PRKNO60260 465 aaPredicted RBP11.23□□□□□ -0.61
HMGB2-201ENST00000296503 PRAMEF2O60811 474 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 IL3P08700 152 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 LINC00032P0C843 101 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 PORP16435 677 aaPredicted RBP11.23□□□□□ -0.61
HMGB2-201ENST00000296503 TIA1P31483 386 aaKnown RBP eCLIP11.23□□□□□ -0.618e-8■■■■□ 23.5
HMGB2-201ENST00000296503 SERPINB5P36952 375 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 FEN1P39748 380 aaKnown RBP11.23□□□□□ -0.61
HMGB2-201ENST00000296503 CYB561P49447 251 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 RNF4P78317 190 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 HPCAP84074 193 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 KCNC4Q03721 635 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 CYLC2Q14093 348 aaPredicted RBP11.23□□□□□ -0.61
HMGB2-201ENST00000296503 HEPACAMQ14CZ8 416 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 OR1C1Q15619 314 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 ZNF750Q32MQ0 723 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 ZNF766Q5HY98 468 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 UGT2A3Q6UWM9 527 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 DDIASQ8IXT1 998 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 OR5L2Q8NGL0 311 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 ZNF721Q8TF20 911 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 MIB2Q96AX9 1013 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 SIGLEC12Q96PQ1 595 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 NMUR2Q9GZQ4 415 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 PFDN4Q9NQP4 134 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 KLHL1Q9NR64 748 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 AGPAT4Q9NRZ5 378 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 LRFN1Q9P244 771 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 ITGB1BP2Q9UKP3 347 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 CES1P1Q9UKY3 287 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 YARS2Q9Y2Z4 477 aaKnown RBP11.23□□□□□ -0.61
HMGB2-201ENST00000296503 PTGDR2Q9Y5Y4 395 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 ZNF780BQ9Y6R6 833 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 NBASA2RRP1 2371 aa11.23□□□□□ -0.61
HMGB2-201ENST00000296503 A0A1W2PS29 197 aa11.22□□□□□ -0.61
HMGB2-201ENST00000296503 TMEM233B4DJY2 109 aa11.22□□□□□ -0.61
HMGB2-201ENST00000296503 WWP2O00308 870 aa11.22□□□□□ -0.61
HMGB2-201ENST00000296503 ITGA10O75578 1167 aa11.22□□□□□ -0.61
HMGB2-201ENST00000296503 RSL1D1O76021 490 aaKnown RBP11.22□□□□□ -0.61
HMGB2-201ENST00000296503 HSPA4LO95757 839 aa11.22□□□□□ -0.61
HMGB2-201ENST00000296503 CPMP14384 443 aa11.22□□□□□ -0.61
HMGB2-201ENST00000296503 DRD2P14416 443 aa11.22□□□□□ -0.61
HMGB2-201ENST00000296503 CD46P15529 392 aa11.22□□□□□ -0.61
HMGB2-201ENST00000296503 NT5EP21589 574 aa11.22□□□□□ -0.61
HMGB2-201ENST00000296503 ERVK-8P63133 956 aa11.22□□□□□ -0.61
HMGB2-201ENST00000296503 C2orf80Q0P641 193 aa11.22□□□□□ -0.61
HMGB2-201ENST00000296503 CHI3L2Q15782 390 aa11.22□□□□□ -0.61
HMGB2-201ENST00000296503 ZNF468Q5VIY5 522 aaPredicted RBP11.22□□□□□ -0.61
HMGB2-201ENST00000296503 KANK2Q63ZY3 851 aa11.22□□□□□ -0.61
HMGB2-201ENST00000296503 RPUSD3Q6P087 351 aaKnown RBP11.22□□□□□ -0.61
HMGB2-201ENST00000296503 GALNT18Q6P9A2 607 aa11.22□□□□□ -0.61
HMGB2-201ENST00000296503 C16orf47Q6ZP98 133 aaPredicted RBP11.22□□□□□ -0.61
HMGB2-201ENST00000296503 CROCCP3Q8IVE0 287 aa11.22□□□□□ -0.61
HMGB2-201ENST00000296503 C5orf34Q96MH7 638 aa11.22□□□□□ -0.61
HMGB2-201ENST00000296503 Q9H521 79 aa11.22□□□□□ -0.61
HMGB2-201ENST00000296503 OCEL1Q9H607 264 aa11.22□□□□□ -0.61
HMGB2-201ENST00000296503 SIRT5Q9NXA8 310 aa11.22□□□□□ -0.61
HMGB2-201ENST00000296503 UTS2RQ9UKP6 389 aa11.22□□□□□ -0.61
HMGB2-201ENST00000296503 BLOC1S6Q9UL45 172 aa11.22□□□□□ -0.61
HMGB2-201ENST00000296503 ERVK-19Q9WJR5 959 aa11.22□□□□□ -0.61
HMGB2-201ENST00000296503 POLR3HQ9Y535 204 aaPredicted RBP11.22□□□□□ -0.61
HMGB2-201ENST00000296503 DNAJC15Q9Y5T4 150 aa11.22□□□□□ -0.61
HMGB2-201ENST00000296503 CPAMD8Q8IZJ3 1885 aa11.22□□□□□ -0.61
HMGB2-201ENST00000296503 CROCCQ5TZA2 2017 aa11.22□□□□□ -0.61
HMGB2-201ENST00000296503 HRKO00198 91 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 CDK2AP1O14519 115 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 OR2J2O76002 312 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 CSNK2A2P19784 350 aaPredicted RBP11.21□□□□□ -0.61
HMGB2-201ENST00000296503 GALNSP34059 522 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 CPOXP36551 454 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 HLCSP50747 726 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 SSR4P51571 173 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 NR6A1Q15406 480 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 MAPKAPK3Q16644 382 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 C1orf146Q5VVC0 180 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 SLC25A25Q6KCM7 469 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 NOXRED1Q6NXP6 359 aa11.21□□□□□ -0.61
HMGB2-201ENST00000296503 FAM180BQ6P0A1 224 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms