RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ZNF805Q5CZA5 627 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 SLC8B1Q6J4K2 584 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 MSANTD1Q6ZTZ1 278 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 SDR16C5Q8N3Y7 309 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 ELOA3Q8NG57 546 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 OR8S1Q8NH09 359 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 TBC1D15Q8TC07 691 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 NTMT1Q9BV86 223 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 TSSK6Q9BXA6 273 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 SLC46A2Q9BY10 475 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 RBCK1Q9BYM8 510 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 ZNF385DQ9H6B1 395 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 GORASP2Q9H8Y8 452 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 FOLH1BQ9HBA9 442 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 GSKIPQ9P0R6 139 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 IL20RAQ9UHF4 553 aa11.96□□□□□ -0.5
SLC6A1-201ENST00000287766 CACNB4O00305 520 aaPredicted RBP11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 FARS2O95363 451 aaKnown RBP11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 GBX2P52951 348 aaPredicted RBP11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 FXYD6P3P58550 94 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 SP140Q13342 867 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 RGNQ15493 299 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 AFMIDQ63HM1 303 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 VWA5B2Q8N398 1253 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 FAM109AQ8N4B1 249 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 IQCF1Q8N6M8 205 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 LINC01599Q8WXQ3 324 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 OR51E2Q9H255 320 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 FARSAQ9Y285 508 aaKnown RBP11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 CTDSP2O14595 271 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 ARL6IP5O75915 188 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 CD9P21926 228 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 CRISP3P54108 245 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 ERVK-25P63136 954 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 ZNF630Q2M218 657 aaPredicted RBP11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 NDUFAF5Q5TEU4 345 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 QSOX2Q6ZRP7 698 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 GPR149Q86SP6 731 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 JAZF1Q86VZ6 243 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 CPA6Q8N4T0 437 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 TRIB3Q96RU7 358 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 BCL7BQ9BQE9 202 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 VNN2O95498 520 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 CHMP24386 653 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 EDNRAP25101 427 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 AOAHP28039 575 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 CNR2P34972 360 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 S100A10P60903 97 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 YBX1P67809 324 aaKnown RBP11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 GINS1Q14691 196 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 CCSMST1Q4G0I0 132 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 KLHL26Q53HC5 615 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 HSDL2Q6YN16 418 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 B3GNT8Q7Z7M8 397 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 ZSWIM9Q86XI8 627 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 OR51G2Q8NGK0 314 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 DPF3Q92784 378 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 RANGRFQ9HD47 186 aaPredicted RBP11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 MRPS30Q9NP92 439 aaKnown RBP11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 GPN3Q9UHW5 284 aaPredicted RBP11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 ZNF225Q9UK10 706 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 FER1L6Q2WGJ9 1857 aa11.95□□□□□ -0.5
SLC6A1-201ENST00000287766 J3KTA2 159 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 PROM1O43490 865 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 HMGN1P05114 100 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 SYN1P17600 705 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 SSTR2P30874 369 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 AIMP2Q13155 320 aaKnown RBP11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 IRF5Q13568 498 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 RAB33AQ14088 237 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 SLC14A2Q15849 920 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 XKR7Q5GH72 579 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 SHFQ7M4L6 423 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 TSPYL5Q86VY4 417 aaPredicted RBP11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 ELMOD3Q96FG2 381 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 HSPA12BQ96MM6 686 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 TM9SF2Q99805 663 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 SH2B3Q9UQQ2 575 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 CCL26Q9Y258 94 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 PCDH17O14917 1159 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 H2AFB2P0C5Z0 115 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 CCL5P13501 91 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 PNLIPRP1P54315 467 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 PPP3R1P63098 170 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 KRBOX4Q5JUW0 171 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 LIMS2Q7Z4I7 341 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 NRARPQ7Z6K4 114 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 GPALPP1Q8IXQ4 340 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 PXYLP1Q8TE99 480 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 ZNF296Q8WUU4 475 aaPredicted RBP11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 CCDC32Q9BV29 185 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 CDADC1Q9BWV3 514 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 TRIM36Q9NQ86 728 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 ENPP5Q9UJA9 477 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 SLC27A6Q9Y2P4 619 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 ATAD5Q96QE3 1844 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 AGAP5A6NIR3 686 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 LRRN3E7EW58 273 aa11.94□□□□□ -0.5
SLC6A1-201ENST00000287766 HTR2AP28223 471 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms