RNA–Protein interactions for RNA: ENST00000274065.8

RPS3A-201, Transcript of ribosomal protein S3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS3A, Length 934 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-201ENST00000274065 TMEM41AQ96HV5 264 aa7.52□□□□□ -1.21
RPS3A-201ENST00000274065 DGAT2Q96PD7 388 aa7.52□□□□□ -1.21
RPS3A-201ENST00000274065 TMEM204Q9BSN7 226 aa7.52□□□□□ -1.21
RPS3A-201ENST00000274065 KRTAP9-9Q9BYP9 154 aa7.52□□□□□ -1.21
RPS3A-201ENST00000274065 KRTAP9-4Q9BYQ2 154 aa7.52□□□□□ -1.21
RPS3A-201ENST00000274065 KLHL4Q9C0H6 718 aa7.52□□□□□ -1.21
RPS3A-201ENST00000274065 REXO4Q9GZR2 422 aaKnown RBP7.52□□□□□ -1.21
RPS3A-201ENST00000274065 PRDM7Q9NQW5 492 aa7.52□□□□□ -1.21
RPS3A-201ENST00000274065 TMEM160Q9NX00 188 aa7.52□□□□□ -1.21
RPS3A-201ENST00000274065 ELOVL5Q9NYP7 299 aa7.52□□□□□ -1.21
RPS3A-201ENST00000274065 IKZF3Q9UKT9 509 aa7.52□□□□□ -1.21
RPS3A-201ENST00000274065 SLC22A14Q9Y267 594 aa7.52□□□□□ -1.21
RPS3A-201ENST00000274065 IQANK1A0A1B0GTG1 560 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 ZCWPW2A0A1B0GU75 182 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 AP3B1O00203 1094 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 HCRTR2O43614 444 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 CGAP01215 116 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 CLPSP04118 112 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 DANCRP0C864 163 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 COX7A2P14406 83 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 CHMP24386 653 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 CFPP27918 469 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 LHX2P50458 406 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 TERF1P54274 439 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 CASP9P55211 416 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 CDKN2DP55273 166 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 SLC37A1P57057 533 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 HERVK_113P63132 956 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 ERVK-8P63133 956 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 IGLV3-21P80748 117 aaPredicted RBP7.51□□□□□ -1.21
RPS3A-201ENST00000274065 FUT7Q11130 342 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 GPS1Q13098 491 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 DHX34Q14147 1143 aaKnown RBP7.51□□□□□ -1.21
RPS3A-201ENST00000274065 SLBPQ14493 270 aaKnown RBP eCLIP7.51□□□□□ -1.21
RPS3A-201ENST00000274065 KBTBD12Q3ZCT8 623 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 UBAP2Q5T6F2 1119 aaKnown RBP7.51□□□□□ -1.21
RPS3A-201ENST00000274065 CASC4Q6P4E1 433 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 TRIM40Q6P9F5 258 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 ENPP6Q6UWR7 440 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 ANGPTL8Q6UXH0 198 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 TMIGD1Q6UXZ0 262 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 RNF111Q6ZNA4 994 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 IL17RELQ6ZVW7 336 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 UBE3DQ7Z6J8 389 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 VSTM4Q8IW00 320 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 TAGAPQ8N103 731 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 ZNF610Q8N9Z0 462 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 OR1J4Q8NGS1 313 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 LILRB1Q8NHL6 650 aaPredicted RBP7.51□□□□□ -1.21
RPS3A-201ENST00000274065 RAB3IL1Q8TBN0 382 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 RDH11Q8TC12 318 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 CAVIN3Q969G5 261 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 ZNF669Q96BR6 464 aaPredicted RBP7.51□□□□□ -1.21
RPS3A-201ENST00000274065 F2RL3Q96RI0 385 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 KRT12Q99456 494 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 SLC39A3Q9BRY0 314 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 ERVK-6Q9BXR3 956 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 SHARPINQ9H0F6 387 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 COPS7BQ9H9Q2 264 aaPredicted RBP7.51□□□□□ -1.21
RPS3A-201ENST00000274065 LYRM4Q9HD34 91 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 SERHLQ9NQF3 203 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 WWOXQ9NZC7 414 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 LPAR3Q9UBY5 353 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 FBXO5Q9UKT4 447 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 ERVK-19Q9WJR5 959 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 LIPT1Q9Y234 373 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 MAGED1Q9Y5V3 778 aaPredicted RBP7.51□□□□□ -1.21
RPS3A-201ENST00000274065 COMMD10Q9Y6G5 202 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 PRR14LQ5THK1 2151 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 PKD1L1Q8TDX9 2849 aa7.51□□□□□ -1.21
RPS3A-201ENST00000274065 PABPN1LA6NDY0 278 aaKnown RBP7.5□□□□□ -1.21
RPS3A-201ENST00000274065 GOLGA6L19H0YKK7 550 aa7.5□□□□□ -1.21
RPS3A-201ENST00000274065 CDC7O00311 574 aa7.5□□□□□ -1.21
RPS3A-201ENST00000274065 RTCAO00442 366 aaKnown RBP7.5□□□□□ -1.21
RPS3A-201ENST00000274065 CLEC3AO75596 197 aa7.5□□□□□ -1.21
RPS3A-201ENST00000274065 FTCDO95954 541 aa7.5□□□□□ -1.21
RPS3A-201ENST00000274065 MBD3O95983 291 aa7.5□□□□□ -1.21
RPS3A-201ENST00000274065 TPM3P06753 285 aa7.5□□□□□ -1.21
RPS3A-201ENST00000274065 CRHP06850 196 aa7.5□□□□□ -1.21
RPS3A-201ENST00000274065 TPM1P09493 284 aa7.5□□□□□ -1.21
RPS3A-201ENST00000274065 C1GALT1C1LP0DN25 315 aa7.5□□□□□ -1.21
RPS3A-201ENST00000274065 ZNF16P17020 682 aaPredicted RBP7.5□□□□□ -1.21
RPS3A-201ENST00000274065 EGR1P18146 543 aa7.5□□□□□ -1.21
RPS3A-201ENST00000274065 SRD5A1P18405 259 aa7.5□□□□□ -1.21
RPS3A-201ENST00000274065 TBXA2RP21731 343 aa7.5□□□□□ -1.21
RPS3A-201ENST00000274065 SLC6A12P48065 614 aa7.5□□□□□ -1.21
RPS3A-201ENST00000274065 GFRA1P56159 465 aa7.5□□□□□ -1.21
RPS3A-201ENST00000274065 CLDN18P56856 261 aa7.5□□□□□ -1.21
RPS3A-201ENST00000274065 FAPQ12884 760 aa7.5□□□□□ -1.21
RPS3A-201ENST00000274065 ZNF267Q14586 743 aaPredicted RBP7.5□□□□□ -1.21
RPS3A-201ENST00000274065 MSMPQ1L6U9 139 aa7.5□□□□□ -1.21
RPS3A-201ENST00000274065 EXOSC6Q5RKV6 272 aaKnown RBP7.5□□□□□ -1.21
RPS3A-201ENST00000274065 RBM20Q5T481 1227 aaKnown RBP7.5□□□□□ -1.21
RPS3A-201ENST00000274065 BHLHB9Q6PI77 547 aa7.5□□□□□ -1.21
RPS3A-201ENST00000274065 P4HA3Q7Z4N8 544 aa7.5□□□□□ -1.21
RPS3A-201ENST00000274065 MILR1Q7Z6M3 343 aa7.5□□□□□ -1.21
RPS3A-201ENST00000274065 PRR22Q8IZ63 422 aa7.5□□□□□ -1.21
RPS3A-201ENST00000274065 GPATCH11Q8N954 259 aa7.5□□□□□ -1.21
RPS3A-201ENST00000274065 TTLQ8NG68 377 aa7.5□□□□□ -1.21
RPS3A-201ENST00000274065 OR14L1PQ8NHC6 308 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms