RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 CPSF6Q16630 551 aaKnown RBP eCLIP8.17□□□□□ -1.15e-7■□□□□ 10.7
TPM3-201ENST00000271850 FLYWCH1Q4VC44 716 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 TECRLQ5HYJ1 363 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 NHSL2Q5HYW2 709 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 WIPI1Q5MNZ9 446 aaPredicted RBP8.17□□□□□ -1.1
TPM3-201ENST00000271850 LIPJQ5W064 366 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 NSUN5P2Q63ZY6 315 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 PAMR1Q6UXH9 720 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 ADGRE4PQ86SQ3 457 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 WFDC11Q8NEX6 87 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 MBD3L2Q8NHZ7 208 aaPredicted RBP8.17□□□□□ -1.1
TPM3-201ENST00000271850 RHEBL1Q8TAI7 183 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 LINC01560Q8TB33 94 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 CDKL2Q92772 493 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 RNASE6Q93091 150 aaKnown RBP8.17□□□□□ -1.1
TPM3-201ENST00000271850 HGDQ93099 445 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 ZNF597Q96LX8 424 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 NODALQ96S42 347 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 SMR3AQ99954 134 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 UGT2B28Q9BY64 529 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 NXF5Q9H1B4 397 aaKnown RBP8.17□□□□□ -1.1
TPM3-201ENST00000271850 PLEKHF2Q9H8W4 249 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 NMRAL1Q9HBL8 299 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 SNX15Q9NRS6 342 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 MS4A12Q9NXJ0 267 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 CNIH4Q9P003 139 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 B4GALT7Q9UBV7 327 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 PHF11Q9UIL8 331 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 ZNF225Q9UK10 706 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 NPFFR2Q9Y5X5 522 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 SPACA6W5XKT8 324 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 ABCA2Q9BZC7 2435 aa8.17□□□□□ -1.1
TPM3-201ENST00000271850 ZANQ9Y493 2812 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 CUBNO60494 3623 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 IQANK1A0A1B0GTG1 560 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 C2orf92A0A1B0GVN3 265 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 OR6C76A6NM76 312 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 HSPB2A8KAH6 182 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 AHRRA9YTQ3 701 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 FOXE1O00358 373 aaPredicted RBP8.16□□□□□ -1.1
TPM3-201ENST00000271850 OR10H2O60403 315 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 UGDHO60701 494 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 NME6O75414 186 aaPredicted RBP8.16□□□□□ -1.1
TPM3-201ENST00000271850 CBX7O95931 251 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 S100BP04271 92 aaPredicted RBP8.16□□□□□ -1.1
TPM3-201ENST00000271850 ABCB1P08183 1280 aaPredicted RBP8.16□□□□□ -1.1
TPM3-201ENST00000271850 GSTA2P09210 222 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 SBK3P0C264 359 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 ABCD3P28288 659 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 CRABP2P29373 138 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 BUD31P41223 144 aaPredicted RBP8.16□□□□□ -1.1
TPM3-201ENST00000271850 MAGEA4P43358 317 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 MAGEA12P43365 314 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 MAP2K3P46734 347 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 ALDH18A1P54886 795 aaKnown RBP8.16□□□□□ -1.1
TPM3-201ENST00000271850 PLTPP55058 493 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 GALNT1Q10472 559 aaPredicted RBP8.16□□□□□ -1.1
TPM3-201ENST00000271850 GTF2H2Q13888 395 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 DAZAP2Q15038 168 aaPredicted RBP8.16□□□□□ -1.1
TPM3-201ENST00000271850 HSPB2Q16082 182 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 NNATQ16517 81 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 MROH9Q5TGP6 573 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 FAM180BQ6P0A1 224 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 GTF2H2CQ6P1K8 395 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 FAM111BQ6SJ93 734 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 RAPH1Q70E73 1250 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 SLC29A4Q7RTT9 530 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 TBC1D1Q86TI0 1168 aaPredicted RBP8.16□□□□□ -1.1
TPM3-201ENST00000271850 MYLK4Q86YV6 388 aaPredicted RBP8.16□□□□□ -1.1
TPM3-201ENST00000271850 LACC1Q8IV20 430 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 DND1Q8IYX4 353 aaKnown RBP8.16□□□□□ -1.1
TPM3-201ENST00000271850 SLC44A1Q8WWI5 657 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 DIO2Q92813 273 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 TP53INP1Q96A56 240 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 MBD6Q96DN6 1003 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 TMEM41AQ96HV5 264 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 ART5Q96L15 291 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 ALPK1Q96QP1 1244 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 MRPL1Q9BYD6 325 aaKnown RBP8.16□□□□□ -1.1
TPM3-201ENST00000271850 OR10A5Q9H207 317 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 EPB41L4BQ9H329 900 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 IPPKQ9H8X2 491 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 ACTR8Q9H981 624 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 GALNT9Q9HCQ5 603 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 FARSBQ9NSD9 589 aaKnown RBP8.16□□□□□ -1.1
TPM3-201ENST00000271850 LYARQ9NX58 379 aaKnown RBP8.16□□□□□ -1.1
TPM3-201ENST00000271850 PSD3Q9NYI0 1048 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 ADGRE2Q9UHX3 823 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 ZNF639Q9UID6 485 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 PCDHGA11Q9Y5H2 935 aa8.16□□□□□ -1.1
TPM3-201ENST00000271850 MED12LQ86YW9 2145 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 ESYT3A0FGR9 886 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 CD8B2A6NJW9 211 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 GNB5O14775 395 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 UGT2B11O75310 529 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 SEMA3DO95025 777 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 KLHL2O95198 593 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 HRGP04196 525 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 KLK1P06870 262 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 CPMP14384 443 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms