RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 CD97P48960 835 aa17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 TMED10P49755 219 aaKnown RBP17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 MRPS35P82673 323 aaKnown RBP17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 DUSP2Q05923 314 aa17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 MGAT2Q10469 447 aa17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 HSPB3Q12988 150 aa17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 EXOSC7Q15024 291 aaKnown RBP17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 MLC1Q15049 377 aa17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 OR1C1Q15619 314 aa17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 PGS1Q32NB8 556 aa17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 PLEKHN1Q494U1 663 aaPredicted RBP17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 SLC9B1Q4ZJI4 515 aa17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 TRMT12Q53H54 448 aaKnown RBP17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 PIGGQ5H8A4 983 aa17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 PRICKLE2Q7Z3G6 844 aa17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 CYP4Z2PQ8N1L4 340 aa17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 FAM98AQ8NCA5 519 aaKnown RBP17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 CATSPER1Q8NEC5 780 aa17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 OR7A2PQ8NGA2 310 aa17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 OR52R1Q8NGF1 315 aa17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 C16orf52Q8NHV5 167 aa17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 CIDECQ96AQ7 238 aaPredicted RBP17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 COQ8BQ96D53 544 aa17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 RASL10BQ96S79 203 aa17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 DUSP26Q9BV47 211 aa17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 TRIM45Q9H8W5 580 aaPredicted RBP17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 LIN28AQ9H9Z2 209 aaKnown RBP17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 TIMMDC1Q9NPL8 285 aa17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 TCF7L2Q9NQB0 619 aa17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 DDX18Q9NVP1 670 aaKnown RBP17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 AIG1Q9NVV5 245 aa17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 ANKRD10Q9NXR5 420 aa17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 PCDHGB4Q9UN71 923 aa17.37■□□□□ 0.37
CYSTM1-201ENST00000261811 A0A1W2PRB8 838 aa17.36■□□□□ 0.37
CYSTM1-201ENST00000261811 UBDO15205 165 aa17.36■□□□□ 0.37
CYSTM1-201ENST00000261811 MAN1A2O60476 641 aa17.36■□□□□ 0.37
CYSTM1-201ENST00000261811 EDF1O60869 148 aaKnown RBP17.36■□□□□ 0.37
CYSTM1-201ENST00000261811 S1PR1P21453 382 aa17.36■□□□□ 0.37
CYSTM1-201ENST00000261811 FRKP42685 505 aaPredicted RBP17.36■□□□□ 0.37
CYSTM1-201ENST00000261811 AQP5P55064 265 aa17.36■□□□□ 0.37
CYSTM1-201ENST00000261811 IRX1P78414 480 aaPredicted RBP17.36■□□□□ 0.37
CYSTM1-201ENST00000261811 ZNHIT3Q15649 155 aaPredicted RBP17.36■□□□□ 0.37
CYSTM1-201ENST00000261811 INAQ16352 499 aa17.36■□□□□ 0.37
CYSTM1-201ENST00000261811 ZNF766Q5HY98 468 aa17.36■□□□□ 0.37
CYSTM1-201ENST00000261811 RPUSD3Q6P087 351 aaKnown RBP17.36■□□□□ 0.37
CYSTM1-201ENST00000261811 TMEM107Q6UX40 140 aa17.36■□□□□ 0.37
CYSTM1-201ENST00000261811 CAMKMTQ7Z624 323 aa17.36■□□□□ 0.37
CYSTM1-201ENST00000261811 ZNF605Q86T29 641 aa17.36■□□□□ 0.37
CYSTM1-201ENST00000261811 RIMKLAQ8IXN7 391 aa17.36■□□□□ 0.37
CYSTM1-201ENST00000261811 KRTCAP2Q8N6L1 136 aa17.36■□□□□ 0.37
CYSTM1-201ENST00000261811 GLB1L3Q8NCI6 653 aaPredicted RBP17.36■□□□□ 0.37
CYSTM1-201ENST00000261811 CCDC28BQ9BUN5 200 aa17.36■□□□□ 0.37
CYSTM1-201ENST00000261811 TMEM200CA6NKL6 621 aa17.35■□□□□ 0.37
CYSTM1-201ENST00000261811 ZNF195O14628 629 aa17.35■□□□□ 0.37
CYSTM1-201ENST00000261811 CFLARO15519 480 aa17.35■□□□□ 0.37
CYSTM1-201ENST00000261811 CBX7O95931 251 aa17.35■□□□□ 0.37
CYSTM1-201ENST00000261811 VIMP08670 466 aaKnown RBP17.35■□□□□ 0.37
CYSTM1-201ENST00000261811 TROVE2P10155 538 aaKnown RBP eCLIP17.35■□□□□ 0.37
CYSTM1-201ENST00000261811 LAMP1P11279 417 aa17.35■□□□□ 0.37
CYSTM1-201ENST00000261811 NR0B1P51843 470 aaKnown RBP17.35■□□□□ 0.37
CYSTM1-201ENST00000261811 STX1BP61266 288 aa17.35■□□□□ 0.37
CYSTM1-201ENST00000261811 PRR5P85299 388 aa17.35■□□□□ 0.37
CYSTM1-201ENST00000261811 ZNF385BQ569K4 471 aa17.35■□□□□ 0.37
CYSTM1-201ENST00000261811 ANXA8L1Q5VT79 327 aa17.35■□□□□ 0.37
CYSTM1-201ENST00000261811 SPINK14Q6IE38 97 aa17.35■□□□□ 0.37
CYSTM1-201ENST00000261811 IL20RBQ6UXL0 311 aa17.35■□□□□ 0.37
CYSTM1-201ENST00000261811 ZNF551Q7Z340 670 aaPredicted RBP17.35■□□□□ 0.37
CYSTM1-201ENST00000261811 OR5P2Q8WZ92 322 aa17.35■□□□□ 0.37
CYSTM1-201ENST00000261811 TESCQ96BS2 214 aa17.35■□□□□ 0.37
CYSTM1-201ENST00000261811 ELP4Q96EB1 424 aa17.35■□□□□ 0.37
CYSTM1-201ENST00000261811 HSPBAP1Q96EW2 488 aa17.35■□□□□ 0.37
CYSTM1-201ENST00000261811 LCORQ96JN0 433 aaPredicted RBP17.35■□□□□ 0.37
CYSTM1-201ENST00000261811 SGCZQ96LD1 299 aa17.35■□□□□ 0.37
CYSTM1-201ENST00000261811 NEUROD4Q9HD90 331 aa17.35■□□□□ 0.37
CYSTM1-201ENST00000261811 MAP10Q9P2G4 905 aa17.35■□□□□ 0.37
CYSTM1-201ENST00000261811 C19orf53Q9UNZ5 99 aaPredicted RBP17.35■□□□□ 0.37
CYSTM1-201ENST00000261811 CSAG2Q9Y5P2 127 aa17.35■□□□□ 0.37
CYSTM1-201ENST00000261811 TTC36A6NLP5 189 aa17.34■□□□□ 0.37
CYSTM1-201ENST00000261811 ACOX3O15254 700 aa17.34■□□□□ 0.37
CYSTM1-201ENST00000261811 SLC28A2O43868 658 aa17.34■□□□□ 0.37
CYSTM1-201ENST00000261811 SLC25A12O75746 678 aa17.34■□□□□ 0.37
CYSTM1-201ENST00000261811 C1QL1O75973 258 aa17.34■□□□□ 0.37
CYSTM1-201ENST00000261811 SORBS2O94875 1100 aaKnown RBP17.34■□□□□ 0.37
CYSTM1-201ENST00000261811 CLPSP04118 112 aa17.34■□□□□ 0.37
CYSTM1-201ENST00000261811 SP1P08047 785 aa17.34■□□□□ 0.37
CYSTM1-201ENST00000261811 DRD5P21918 477 aa17.34■□□□□ 0.37
CYSTM1-201ENST00000261811 GPX3P22352 226 aa17.34■□□□□ 0.37
CYSTM1-201ENST00000261811 S100A3P33764 101 aa17.34■□□□□ 0.37
CYSTM1-201ENST00000261811 PTGER1P34995 402 aa17.34■□□□□ 0.37
CYSTM1-201ENST00000261811 MDH1P40925 334 aaKnown RBP17.34■□□□□ 0.37
CYSTM1-201ENST00000261811 SOX3P41225 446 aa17.34■□□□□ 0.37
CYSTM1-201ENST00000261811 MC3RP41968 323 aa17.34■□□□□ 0.37
CYSTM1-201ENST00000261811 KIR3DL1P43629 444 aa17.34■□□□□ 0.37
CYSTM1-201ENST00000261811 PPICP45877 212 aa17.34■□□□□ 0.37
CYSTM1-201ENST00000261811 IDH3AP50213 366 aa17.34■□□□□ 0.37
CYSTM1-201ENST00000261811 RPP38P78345 283 aaKnown RBP17.34■□□□□ 0.37
CYSTM1-201ENST00000261811 LRRC74AQ0VAA2 488 aa17.34■□□□□ 0.37
CYSTM1-201ENST00000261811 MAPKAPK3Q16644 382 aa17.34■□□□□ 0.37
CYSTM1-201ENST00000261811 PRSS53Q2L4Q9 553 aa17.34■□□□□ 0.37
CYSTM1-201ENST00000261811 SLC25A25Q6KCM7 469 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms